Stigmatella aurantiaca: STAUR_3765
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Entry
STAUR_3765 CDS
T01425
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sur
Stigmatella aurantiaca
Pathway
sur03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sur00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
STAUR_3765 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sur03021
]
STAUR_3765 (rpoA)
03400 DNA repair and recombination proteins [BR:
sur03400
]
STAUR_3765 (rpoA)
Enzymes [BR:
sur01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
STAUR_3765 (rpoA)
Transcription machinery [BR:
sur03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
STAUR_3765 (rpoA)
DNA repair and recombination proteins [BR:
sur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
STAUR_3765 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
IL11
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
ADO71553
UniProt:
Q08ZH0
LinkDB
All DBs
Position
4509677..4510708
Genome browser
AA seq
343 aa
AA seq
DB search
MADTFIAKNWRDLIKPRRLEVDQDSLSTTYGKFVAEPLERGFGTTLGNSLRRVLLSSLQG
SAITSVKIENVDHEFTTLPEVAEDVTDIVLNLKEVLLRMHTNETKTLRIEAEGPKEIKAG
DIIADQDVEILNPGHHICTVSEGGKVRMELSCRRGRGYVPASVNKVAGAPLGTIPIDSLF
APIRKVNYQVTNARVGQVTDYDKLTLEVWTDGSVTPQDAVAYAAKIIKEQLTVFVNFDET
EEPVVAEAPKEEAKLNENLFRSVDELELSVRSANCLQQANIKSIGDLVQRTEAEMLKTKN
FGRKSLKEIKEILAEMGLSLGMKLENWPPKIPPAAAPSTQPKA
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggcggatacgttcattgcgaagaactggcgtgacctcatcaagccgcgccggctggaa
gtggatcaggactcgctgagcacgacctacgggaagttcgtggcggagcccctggagcgc
ggtttcggcaccacgctgggcaactcgctgcgccgggtgctcttgtcctccctgcagggc
tcggccatcacctcggtgaagatcgagaatgtggaccacgagttcaccacgctccccgag
gtggccgaggacgtcaccgacatcgtgctgaacctgaaggaagtcctccttcggatgcac
acgaacgagacgaagacgctccgcatcgaggcggaagggcccaaggagatcaaggccggt
gacatcatcgccgaccaggatgtggagatcctcaaccccggccaccacatctgcacggtg
tccgaggggggcaaggtgcgcatggagctgtcgtgccgccgcggccgtggctacgtccct
gcctccgtcaacaaggtggcgggcgcgcccctgggcacgatccccatcgactcgctcttc
gcgcccatccgcaaggtgaactaccaggtcaccaacgcccgcgtcggtcaggtcacggac
tacgacaagctgacgctcgaggtgtggacggatggctccgtcaccccgcaggacgcggtg
gcgtacgcggcgaagatcatcaaggagcagctcacggtcttcgtgaacttcgacgagacc
gaggagcccgtggtggcggaggccccgaaggaggaggccaagctcaacgagaacctgttc
cgctcggtggatgagctggagctctcggttcgctcggccaactgcctccagcaggccaac
atcaagagcatcggggacctggtgcagcgcaccgaggccgagatgctcaagacgaagaac
ttcggccgcaagtcgctcaaggagatcaaggagatcctcgcggagatgggtctgtcgctc
ggcatgaagttggagaactggccgccgaagatccctccggccgctgctccgagcacgcag
cccaaggcctag
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