Stigmatella aurantiaca: STAUR_3825
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Entry
STAUR_3825 CDS
T01425
Symbol
sigB
Name
(GenBank) RNA polymerase sigma-B factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
sur
Stigmatella aurantiaca
Brite
KEGG Orthology (KO) [BR:
sur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sur03021
]
STAUR_3825 (sigB)
Transcription machinery [BR:
sur03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
STAUR_3825 (sigB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
HTH_11
Fe_dep_repress
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
ADO71613
UniProt:
Q01624
LinkDB
All DBs
Position
complement(4575048..4575938)
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AA seq
296 aa
AA seq
DB search
MQISNDPSSHSGSLTMYLSEINQYGLLSVEEEQALARKFVKGDLAAGHRLVTSNLRFVVK
VSYEYRSYGIKMSDLIQEGNIGLMKAVQKFDPDKGIRLISYAVWWIRAYIQNYILKSWSL
VKLGTTQAQRKLFFSLARTRRELEKFGAGDGAVVNVDEIANKLNVKASEVREMEQRMGGR
DLSLDAPMGEDGGNSHVDFVASAAAPQDDEFADKEEAGLINSRVHMALMRLDPRERFIIE
QRVMNERPMTLKELGEHFGFSRERARQLEIRAKDKLKAELAALLAEVDPDAAAALQ
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctccaacgatccgtcgtcccactctggctccctgacgatgtacctctcggag
atcaaccagtacggccttctgtccgtcgaggaagagcaagccctggcccggaagttcgtc
aagggagacctcgccgcgggccaccggctcgtcacctcgaacctgcgcttcgtggtgaag
gtgtcctacgagtaccgctcctacggcatcaagatgagcgacctcatccaggaggggaac
atcggcctgatgaaggcggtgcagaagttcgacccggacaagggcatccgcctcatctcc
tacgcggtgtggtggatccgcgcgtacatccagaactacatcctcaagagctggtcgctg
gtgaagctgggcaccactcaggcgcagcggaagctgttcttcagcctggcgcgcacccgg
cgcgagctggagaagttcggcgccggcgacggggcggtggtgaacgtggatgagatcgcc
aacaagctgaacgtgaaggcctccgaggtgcgcgagatggagcagcgcatgggcgggcgg
gatctgtccctggacgcgcccatgggcgaggacggaggcaacagccacgtggacttcgtg
gcgagcgccgccgcgccgcaggatgacgagttcgccgacaaggaggaggcgggcctcatc
aacagccgcgtgcacatggccctcatgcggctggacccgcgcgagcgcttcatcattgag
cagcgcgtcatgaacgagcggcccatgacgctcaaggagctgggcgagcacttcggcttc
tcgcgcgagcgcgcccgccagctggaaatccgcgccaaggacaagctcaaggcggagctg
gcggcgctgctggccgaggtggacccggatgccgcggcggccctccagtag
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