Stigmatella aurantiaca: STAUR_3935
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Entry
STAUR_3935 CDS
T01425
Name
(GenBank) conserved uncharacterized protein
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
sur
Stigmatella aurantiaca
Brite
KEGG Orthology (KO) [BR:
sur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sur03016
]
STAUR_3935
Enzymes [BR:
sur01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
STAUR_3935
Transfer RNA biogenesis [BR:
sur03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
STAUR_3935
Prokaryotic type
STAUR_3935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
PUB_1
Motif
Other DBs
NCBI-ProteinID:
ADO71723
UniProt:
Q08WF9
LinkDB
All DBs
Position
complement(4716048..4716899)
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AA seq
283 aa
AA seq
DB search
MLTAVQAGPYTVRGISLGGVYTSLQIPELGVVLDAGVPIRSFAGTDRLFLSHGHPDHSSA
LGSLLGIRGLVGKAAPLQVFLPAEIEAAVQEALAAAGRLHRSSTTIQAFPMLPGEERHLS
HGLWVRAFRTHHAGPSLGYQFLRRVTKLKPEHQAMPGEEIARLRKQGADLFETTERLELA
YATDTLSDVLETAPEVLHSRVLILECTYLDAKHPAEAARERLHTHLDEIIARADRFQNEA
LVLMHFSQAYSPEQVHTLLQERLPALLRDRVRIFAPDSGRWFG
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccgccgtgcaggcagggccctacaccgtccgtggaatttccctcggaggcgtg
tacacctcgctgcaaatccccgagttgggggtggtgctcgacgcgggcgtgcccatccgg
tcattcgcgggaacggacaggctcttcttgagccatggccacccggaccactccagcgcg
ttggggtctttgctgggaatccgggggttggtcggcaaagccgccccccttcaggtgttt
ctccccgcggagatcgaagccgcggtccaggaagccctggcggctgcggggcggctgcac
cgctcctccaccaccatccaggccttccccatgcttccaggggaggaaagacacctctca
cacggcctctgggtgagggccttccgcacgcaccatgcgggtccgtccctcggctaccag
tttctgcgccgcgtcaccaagctgaagcccgagcaccaggccatgccgggcgaggagatc
gcccgcctgcgcaagcaaggcgcggacctcttcgagacgacggagcggctcgagctggcc
tacgccaccgacacgctgtcggacgtcctggagacggcccccgaggtgctccacagccgc
gtgctgattctggagtgcacgtacctcgacgcgaagcacccggcggaggcagcccgggag
cggctgcacacccacctggacgaaatcatcgcccgggcagaccgcttccagaacgaggcc
ctggtgctgatgcacttcagccaggcctactccccagagcaggtccacaccctcctccag
gagcggctccccgccctcttgagggaccgggtgcggatcttcgccccggactcgggccgc
tggttcggctga
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