Stigmatella aurantiaca: STAUR_4306
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Entry
STAUR_4306 CDS
T01425
Symbol
rnc
Name
(GenBank) Ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
sur
Stigmatella aurantiaca
Brite
KEGG Orthology (KO) [BR:
sur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sur03019
]
STAUR_4306 (rnc)
03009 Ribosome biogenesis [BR:
sur03009
]
STAUR_4306 (rnc)
03036 Chromosome and associated proteins [BR:
sur03036
]
STAUR_4306 (rnc)
Enzymes [BR:
sur01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
STAUR_4306 (rnc)
Messenger RNA biogenesis [BR:
sur03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
STAUR_4306 (rnc)
Ribosome biogenesis [BR:
sur03009
]
Eukaryotic type
90S particles
RNase
STAUR_4306 (rnc)
Prokaryotic type
rRNA processing factors
STAUR_4306 (rnc)
Chromosome and associated proteins [BR:
sur03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
STAUR_4306 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
ADO72086
UniProt:
Q08V36
LinkDB
All DBs
Position
5254571..5255293
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AA seq
240 aa
AA seq
DB search
MEKQSLQERVQTLETRLGVPFLRKDLGLAALTHKSYFNEHRDAGLQDNERLEFLGDAVVD
LAISHRLMERFPLAAEGELSKLRALIVNEEGLARIARRLSLGELLLLGRGEEMTGGREKN
SLLADALEAVVGAVFLGAGMEPVMVLVDQHFAEALDGVAQGRSGLDYKTKLQEDAQTRLK
VPPRYRVVAEAGPDHEKTFEVEVSIGSELYARATGRNKKEAEQAAARATLDMLRKDDTPK
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
gtggagaagcagagcctgcaggagcgtgtccagacgctggaaacccggctgggggtgccg
tttctccgcaaggacttggggctggcggccctcacccacaagagctacttcaacgagcac
cgggacgcggggctccaggacaacgagcggctggagttcctgggggatgcggtggtggac
ctggccatcagccaccggttgatggagcgcttccccctggccgcggaaggggagctgtcc
aagcttcgggccctcatcgtcaacgaggaagggctggcgcgcatcgcccggcggctgagc
ctgggggagctgctcctgctggggcgcggcgaggagatgacgggcgggcgggagaagaac
tccctgctggccgatgccctggaggccgtcgtgggcgcggtgttcctgggggcggggatg
gagccggtgatggtgctggtggaccagcacttcgccgaggccctggacggcgtggcccag
gggcgcagcggcctggactacaagacgaagctccaggaggacgcgcagacgcggctcaag
gtgcccccgcgctaccgggtggtggccgaggccgggccggaccacgagaagaccttcgag
gtggaggtctccattggctcggagctgtacgcgcgcgccaccggccggaacaagaaggag
gccgagcaggcagccgcccgggccaccctggacatgctccggaaggacgacaccccgaag
tga
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