Stigmatella aurantiaca: STAUR_4431
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Entry
STAUR_4431 CDS
T01425
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
sur
Stigmatella aurantiaca
Brite
KEGG Orthology (KO) [BR:
sur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sur03016
]
STAUR_4431 (truD)
Enzymes [BR:
sur01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
STAUR_4431 (truD)
Transfer RNA biogenesis [BR:
sur03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
STAUR_4431 (truD)
Prokaryotic type
STAUR_4431 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Rabaptin
Motif
Other DBs
NCBI-ProteinID:
ADO72211
UniProt:
E3FVJ7
LinkDB
All DBs
Position
5402052..5403524
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AA seq
490 aa
AA seq
DB search
MRIKQRPEDFSVKESYRFDEVPGGLFRVYLMDKQKLSTFEAVDRIRDAFGLKPGAISFCG
LKDKQGRTEQIIAVQGSDVDVQDANLRLKYLGRTDKPLSAANITSNRFAVTVRSLDESVL
GPLNGAAAEVNRLGVVNYFDSQRFGSLKHGQGFIAKDLIRGDFEAALRNYFAKPSELDRT
EDAKVKQFWRENWGRWDARVPFEGSKKYHRILRSLRDHPGDYVRAFLQIDADYRAMLLFT
YQSYLWNEGVRRYLQILMPREHLFPLRYQAGTLLFHRDASPEALRILREATFPLLGPDST
FKNPQVEEAVQWVLGREKLALKDLRIEESPRLLFFKSEERPVLVFPHKLVLGRPQRDELN
RGSIKSNVAFTLPPGAYATLVVKRLFHFSWREDSPADIRASQRPRLTEAEQEGAPRAPAS
RSRPSSERASPERSRAPGRAAAVRPAEPPPPEPRAAPPPGFREMQRIKKDAKSRARAESA
SKPSKSQKKK
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
gtgcgaatcaagcaaaggcccgaggacttctccgtcaaggagtcctaccgcttcgacgaa
gttcctggcggtcttttccgcgtctacctgatggacaagcagaagctgtccaccttcgag
gcggtggatcgcatccgcgatgcctttgggctcaaaccaggtgccatcagcttctgcggc
ctcaaggacaagcaggggcgcaccgagcagatcatcgccgtgcagggctcggacgtggac
gtgcaggatgcgaacctgcgcctgaagtacctggggcgcacggacaagcccttgtccgcc
gcgaacatcacctccaaccgcttcgccgtcaccgtgcgctcgctggacgagtccgtgctg
gggccgctcaacggggccgcggcggaggtgaaccggctgggggtggtgaactacttcgac
agccagcgcttcggctcgctcaagcacggccagggcttcatcgccaaggatctcatccgc
ggggacttcgaagccgccctgcgcaactacttcgccaagccctcggagctggaccggacc
gaggacgccaaggtgaagcagttctggagggagaactggggccggtgggacgcgcgcgtc
cccttcgagggctcgaagaagtaccaccgcatcctccgctcgctgcgcgaccacccgggc
gactatgtgcgggccttcctccagatcgacgcggactaccgcgcgatgctgctgttcacc
taccagagctacctgtggaacgagggggtgcggcgctacctccagatcctgatgccgcgc
gagcacctgttccccctgcgctaccaggccggcacgctgctgttccaccgggacgcgagc
cccgaggcgctgcgcatcctgcgtgaagcgacgtttccgctgctcgggccggactccacg
ttcaagaacccccaggtggaggaggccgtccagtgggtcctggggagggagaagctcgcg
ctgaaggacttgcggatcgaggagtcgccgcggctgctcttcttcaagagcgaggagcgc
cccgtgctcgtcttcccgcacaagctggtgctgggccgcccgcagcgggacgagctcaac
cggggctccatcaagagcaacgtcgccttcaccctgccccccggcgcctacgccaccctc
gtcgtcaaacgcctcttccacttctcctggcgtgaggacagcccggcggacatccgcgct
tcccagcgcccccggcttaccgaggccgaacaggaaggagccccgcgggcccccgcctcg
cgctcccgcccctcctcggagcgggcttccccggagcgctcccgggcgcctgggcgcgct
gcggccgtccggcccgccgagcccccgccccccgagcctcgggcagcgccgcccccgggc
ttccgggagatgcagcgcatcaagaaggacgccaagagccgggcccgggccgagtcggct
tcgaaaccctcgaaatcacagaagaaaaagtaa
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