Stigmatella aurantiaca: STAUR_4516
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Entry
STAUR_4516 CDS
T01425
Name
(GenBank) tRNA pseudouridylate synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
sur
Stigmatella aurantiaca
Brite
KEGG Orthology (KO) [BR:
sur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sur03016
]
STAUR_4516
Enzymes [BR:
sur01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
STAUR_4516
Transfer RNA biogenesis [BR:
sur03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
STAUR_4516
Prokaryotic type
STAUR_4516
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
ADO72296
UniProt:
E3FX57
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All DBs
Position
5512383..5513141
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AA seq
252 aa
AA seq
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MQSTLEAVLRSTGVPATVMPAGRTDRGVHARMQVVSLRLEAGDTPEALAARLPALLPPDL
GVCAVRRPPPSFHAQWSAAGKTYCYRVQLGGRVSETWRPYVLEAAEEPRLAQRAIAPERL
AELLQGAVGQRDFWAFHASSSPRKPRTLESATVHELEGGLFEIQLRGDSFARYQVRYLVG
SALLTAAGQLPEAQWRAALESAEAIPGLRAAAAGLILWEVRYPPGVDPFPPTERNAPAGL
PREPPFVDASGR
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
gtgcaatcgaccctggaggcggtgcttcgctcgacgggcgtgcccgcgacggtgatgccc
gcggggcgcaccgaccggggcgtccatgcccggatgcaggtggtgagcctccggctggag
gcgggagacaccccggaggccctcgccgcccggctccccgcgctgctcccgccggacctg
ggcgtgtgtgccgtccgcaggccccccccctccttccatgcccagtggagcgcggcggga
aagacgtactgctaccgggtgcagttggggggccgggtctcggagacctggcggccctat
gtgctggaggccgccgaagagccccggttggcgcagcgcgccatcgcccccgagcgcctg
gcggagctgctccaaggcgccgtgggccagcgggacttctgggcgtttcacgcgagctcc
agcccccgcaagccgcggacgctggaatccgccacggtgcacgagttggagggagggttg
ttcgagatccagctgcgcggggactcgttcgcacgctaccaggtgcgctacctcgtgggc
tccgcgctgctcaccgccgccgggcaactccccgaggcgcagtggcgggccgcgctggag
tcggcggaagccatcccggggctccgggccgccgcagcggggctgatcctctgggaggtc
cgctatccgccgggtgtggaccccttcccccccaccgagcgaaatgctcccgccggactg
ccacgagaaccgcccttcgtggacgcgtccggccgctaa
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