| Entry |
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| Symbol |
rpoBC
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| Name |
(GenBank) Bifunctional DNA-directed RNA polymerase subunit beta-beta'
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| KO |
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| Organism |
sur Stigmatella aurantiaca
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:sur00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
STAUR_5013 (rpoBC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:sur03021]
STAUR_5013 (rpoBC)
03400 DNA repair and recombination proteins [BR:sur03400]
STAUR_5013 (rpoBC)
Enzymes [BR:sur01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
STAUR_5013 (rpoBC)
Transcription machinery [BR:sur03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
STAUR_5013 (rpoBC)
DNA repair and recombination proteins [BR:sur03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
STAUR_5013 (rpoBC)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(6191621..6195847)
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| AA seq |
1408 aa
MPTQIQNNFRVRKTFAKIAKIIDIPNLINIQKQSYEKFLQADIAPEKREDLGLQGVFKSV
FPIRDFNETSSLEFVSYHLEKPKYDVDECHQRGMTYSAPIKVVVRLVVWDKDEETGAQSI
RDVKEQEVYFGEIPLMTQNGTFIINGTERVVVSQLHRSPGAFFDHDKGKSHSSGKLLYNA
RIIPYRGSWIDFEFDHKDLLYVRIDRRRKLPATVLIRALGAVQDTAKKNPLTFSGSTEEI
LNYYYATETIYLTSNVDFEKSVELELLPGQRATRDIKTKTGDLIVKKNRKFTRAAIKKLE
AAKMKTLPIDADELFTKVSAYDVVDENTGEVILECNEEVSQEKVDELLKRDIKEFKVLFI
DNLNVGPYLRETLMMDKIETPEQAIMEIYRRLRPGDPPTPETATNLFSNLFFNPERYDLS
KVGRLKLNFKFSLEEPLDGQILTKRDILEVIRYLVDLKNGKGTIDDIDHLGNRRVRAVGE
LLENQYRIGLVRMERAIKERMSLQEIETLMPHDLINAKPVTAVIKEFFGSSQLSQFMDQT
NPLSEVTHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLIASLSTY
ARVNEFGFVETPYRKVEAGSVTADVAFYSALEEEKHTIGQANAETDKKGKFVNALVSSRR
GGEFVQAKAEDVDLMDVSPNQLVSVAASLIPFLENDDANRALMGSNMQRQAVPLLRTAAP
LVGTGIEAIVARDSGVTCVARRDGVVESVDASRIVVKADSQAALSDVSSEVDIYNLLKYQ
RSNQNTCLNQKPIVRKGDRVRKGDVIADGPATETGELALGQNVVVAFMPWQGYNFEDSIL
ISERILRDDVFTSIHIEEFECIARDTKLGKEEITRDIPNVGEEALKDLDESGIIRIGAEV
KPGDVLVGKITPKGETQLSPEEKLLRAIFGEKAGDVRDSSLRVPPGVQGTVINAKVFSRK
GVEKDERAKQIESAEEAKLLKDQNDEIKVLQDSAFSRLRNLLRGKEAQGKLVDDKGKILL
KKGDILNDELLATVPYKYWAEISVGDPLDGRIRDILKSLEDTKEAVKLAFGEKIARIKKG
DELPPGVIKMVKVYVAIKRKLAVGDKMAGRHGNKGVVSRIHPEEDMPYLDDGRPVDIVLN
PLGVPSRMNIGQILETHLGWAAKGVGEQLQRYIEENYSGEQLKKQLKTVYDDKAFGDFVD
ALPDDEVKILCQRLKKGIHVATPVFDGAREPEIHSLFDEARLPRTGQMVLFDGRTGEPFD
QNVTVGVMYMLKLHHLVDEKIHARSIGPYSLVTQQPLGGKAQFGGQRLGEMEVWAMEAYG
AAYTLQEFLTVKSDDVVGRTRMYEAIVKGDNVLESGLPESFNVLLKELQSLALDVELLES
APPERQRSFGGDFGGGGDSDDRKTGTDA |
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| NT seq |
4227 nt +upstreamnt +downstreamnt
atgccgacgcagatccagaacaacttccgcgtgcggaagaccttcgccaagatcgcgaag
atcatcgacattcccaatctcatcaacatccagaagcagtcctacgaaaagttcctccag
gcggacattgcgccggagaagcgcgaggacctcggccttcagggtgtcttcaagtcggtg
tttccgatccgcgacttcaacgagacctcctcgctggagttcgtcagctaccacttggag
aagcccaagtacgacgttgatgagtgccaccagcgtggcatgacctactcggcgcccatc
aaggtcgtcgtccgcctggtcgtatgggacaaggacgaggagaccggcgcccagtccatt
cgcgatgtgaaggagcaggaggtctatttcggcgaaatcccgctgatgacccagaacggg
acgttcatcatcaacggcaccgagcgcgtggtggtcagccagctgcaccgcagcccgggt
gccttcttcgaccacgacaagggcaagagccactcgtctggcaagctgctctacaacgcc
cgcatcatcccgtaccgtggctcgtggatcgacttcgagttcgaccacaaggacctgctg
tacgtgcgcattgaccggcgccgcaagctgcccgccacggtgctcatccgcgccctgggc
gcggttcaggacaccgcgaagaagaacccgctgaccttctcgggctccaccgaggagatc
ctcaactactactacgccaccgagacgatctacctcacgagcaacgtcgacttcgagaag
tcggtggagctggagctgttgccgggtcagcgcgccacgcgcgacatcaagaccaagacg
ggcgacctgatcgtcaagaagaaccgcaagttcacccgcgccgccatcaagaagctcgag
gcggcgaagatgaagacgctgcccatcgacgcggacgagctcttcaccaaggtgtccgcc
tacgacgtggtggacgagaacaccggcgaggtcatcctcgagtgcaacgaggaggtcagc
caggagaaggtggacgagctcctcaagcgggacatcaaggagttcaaggttctgttcatc
gacaacctcaacgtggggccgtacctgcgtgagacgttgatgatggacaagatcgagacg
cccgagcaggcgatcatggagatctaccgccgcctgcgcccgggtgatcctccgacgccc
gagacggccaccaacctcttcagcaacctgttcttcaaccccgagcgctacgatctgtcc
aaggtcggccgcctcaagctgaacttcaagttcagcctcgaggagcccctcgacgggcag
atcctcaccaagcgcgacatcctcgaggtcatccgctacctggtggacctcaagaacggc
aaggggacgatcgacgacatcgatcacctcggcaaccggcgcgtgcgcgcggtgggcgag
ctgctggagaaccagtaccgcatcggtctggtgcgcatggagcgcgcgatcaaggagcgc
atgagcctccaggagatcgaaacgctcatgccgcacgacctgatcaacgccaagccggtg
acggcggtgatcaaggagttcttcgggtccagccagctgtcgcagttcatggatcagacg
aacccgctctccgaggtgacccacaagcgccgcctgtccgccctcgggcctggaggcctc
acccgcgagcgcgcgggcttcgaagtgcgcgacgtgcacccgacgcactacggccgcatc
tgccccatcgagacgccggaaggcccgaacatcggcctcatcgcgtcgctgtccacctac
gcacgcgtcaacgagttcggtttcgtggagacgccgtaccgcaaggtggaggccggctcg
gtgaccgccgacgtggctttctactcggcgctcgaggaggagaagcacaccatcggccag
gccaacgccgagacggacaagaagggcaagttcgtcaacgcgctcgtgtcctcccgccgt
ggcggtgagttcgtccaggccaaggccgaggacgtggacctgatggacgtgtccccgaac
cagctcgtgtcggtggccgcctccctcattccgttcctcgagaacgacgacgccaaccgc
gcgctcatgggttccaacatgcagcgccaggcggtgccgctgctgcgcaccgcggccccg
ctcgtgggcaccggcatcgaggccatcgtggcccgcgactccggcgtgacgtgcgtggcc
cgccgcgacggcgtggtggagtccgtggacgccagccgcatcgtggtcaaggcggactcg
caggcggccctgagcgacgtgtcctccgaggtggacatctacaacctgctcaagtaccag
cgctccaaccagaacacgtgcctcaaccagaagcccatcgtccgcaagggcgaccgggtg
cggaagggcgacgtgatcgccgacggtccggcgacggagaccggtgagctggcgctcggc
cagaacgtggtggtcgcgttcatgccgtggcagggctacaacttcgaggactccatcctc
atcagcgagcgcatcctccgggatgacgtcttcacgtcgattcacatcgaagagttcgag
tgcatcgcgcgggacaccaagctgggcaaggaggagatcacccgcgacattccgaacgtg
ggtgaagaggccctcaaggacctggacgagagcggcatcatccgcatcggcgccgaggtg
aagcccggcgacgtgctggtgggcaagatcaccccgaagggcgagacccagctctccccc
gaggagaagctcctgcgcgccatcttcggtgagaaggccggcgatgtgcgtgacagctcc
ctgcgcgtgcccccgggcgtccagggcaccgtcatcaacgccaaggtcttcagccgcaag
ggcgtggagaaggacgagcgcgccaagcagatcgagtcggccgaggaagccaagctcctc
aaggaccagaacgacgagatcaaggtcctccaggacagcgccttcagccgtctgcgcaac
ctgctgcgtggcaaggaggcccagggcaagctcgtggatgacaagggcaagatcctcctg
aagaagggggacatcctcaacgacgagctgctcgccaccgtgccctacaagtactgggcg
gagatctccgttggcgatccgctggatggccgcatccgcgacatcctcaagagccttgag
gacaccaaggaagcggtgaagctggcattcggcgagaagattgcccgcatcaagaagggc
gacgagttgcccccgggcgtcatcaagatggtgaaggtgtatgtcgccatcaagcgcaag
ctggccgtgggcgacaagatggccggccgtcacggaaacaagggcgtcgtgtcccgcatc
cacccggaagaggacatgccgtacctggacgacggccgtccggtggacatcgtcctcaac
ccgctgggcgtgcccagccgcatgaacatcgggcagatcctcgagacgcacctgggctgg
gcggccaagggcgtcggcgagcagctccagcgctacatcgaggagaactactccggcgag
cagctcaagaagcagctgaagaccgtctatgacgacaaggccttcggcgacttcgtggac
gcgctgcccgacgacgaggtgaagatcctctgccagcgtctgaagaagggcatccacgtc
gccacgccggtgttcgacggcgcgcgcgagccggagatccactcgctcttcgacgaggcg
cgtctgccccgcacgggccagatggtgctcttcgacggccgtaccggtgagccgttcgac
cagaacgtcaccgtgggcgtcatgtacatgctgaagctgcaccacctcgtggacgagaag
atccacgcgcgctccatcgggccttactccctcgtcacgcagcagcccctgggcggcaag
gcccagttcggcggccagcgtctgggagagatggaagtgtgggccatggaggcctacggc
gccgcgtacacgctgcaggagttcctcaccgtcaagtcggacgacgtggtgggccgcacg
cgcatgtacgaggccatcgtcaagggcgacaacgtgctggagtcgggtctccccgagtcc
ttcaacgtgctcctcaaggagctccagtcgctcgccttggacgtggaactgctggagagc
gcgccgcctgagcgtcagcgctcgttcggcggagacttcggcggagggggcgacagcgat
gaccgcaagaccgggaccgatgcgtag |
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