Stigmatella aurantiaca: STAUR_5029
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Entry
STAUR_5029 CDS
T01425
Symbol
rimK
Name
(GenBank) Ribosomal protein
KO
K05844
ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
Organism
sur
Stigmatella aurantiaca
Brite
KEGG Orthology (KO) [BR:
sur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sur03009
]
STAUR_5029 (rimK)
Ribosome biogenesis [BR:
sur03009
]
Prokaryotic type
ribosomal protein modification factors
STAUR_5029 (rimK)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RimK
Rimk_N
GSH-S_ATP
ATPgrasp_ST
Dala_Dala_lig_C
ATP-grasp_3
ATPgrasp_Ter
Glyco_trans_4_4
ATP-grasp_2
Motif
Other DBs
NCBI-ProteinID:
ADO72802
UniProt:
Q08SZ3
LinkDB
All DBs
Position
complement(6203201..6204196)
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AA seq
331 aa
AA seq
DB search
MKITILSRSASIPSTRRLAEAGRARGHQVRVLNPSRVEMHLDGRKPSLYYKRKTLAPGDL
VIPRIALSINSYGLAVVNQFGMCGVPLMNTAQAIAQSRNKMRSLQLLSANGIDIPATVMA
REAADLKEMVGLVGGVPVLVKLLQGQEKHGVMVCESLQSLEAALEAVLGLGHNLVVQQYV
KSTGQDVRVLVVGGHAVAAVWRRPKVGRLSRTLIKGARLEGVELTEAWRGAAERTARLVG
LEVAAVDLLDVKGHPKVFEVNSSPALTEMEAASGMDLATPIIERAEALVAGAPRVDQQEP
LRLEAPGTPRDLSSPPKGTGRSPRKASAGGA
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcacgatcctctcgcgttctgcgtcgattccgtccacccggcgtctggccgag
gctgggcgtgcgagagggcatcaggtgcgcgtcttgaaccccagccgggtagagatgcac
ctggatggacgcaagcccagcctctattacaagcggaagacgctggcgccgggggacctg
gtcatcccgcgcatcgcactctccatcaacagctacgggctggcggtggtgaaccagttt
ggcatgtgcggggtgccgttgatgaacacggcccaggcgattgcgcagtcgcgcaacaag
atgcgctcgctgcaactgctctccgccaacggcatcgatattccggccacggtgatggcg
cgcgaggcggccgatctcaaggaaatggtggggctggtgggcggggtcccggtgctcgtg
aagctcctgcaggggcaggagaagcatggggtcatggtgtgcgagagcctccagtccttg
gaagccgcgctggaggccgtgctcggccttggccacaacctggtggtgcagcagtacgtg
aagagcacggggcaggacgtgcgggtgctggtggtgggcggccatgcggtggcggcggtg
tggcggcggccaaaggtggggcggctctcccgcacgctgatcaaaggagcccggctcgaa
ggggttgagttgacggaggcctggcgcggggcggccgagcggacggcccggctcgtgggg
ctggaggtcgcggccgtggatctcctggatgtgaagggacaccccaaggtcttcgaggtg
aacagctcacccgcgctgacggagatggaggctgcgtccgggatggacctggccaccccc
atcatcgagcgggccgaggcgttggtggctggggcgccccgggtggatcagcaagaaccg
cttcgtctggaagctcccgggacgccgagggatctctcctctccgccgaaaggcaccgga
cggtcgccccggaaggcgtccgccgggggggcgtag
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