Stigmatella aurantiaca: STAUR_5244
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Entry
STAUR_5244 CDS
T01425
Name
(GenBank) Metal-dependent phosphohydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
sur
Stigmatella aurantiaca
Brite
KEGG Orthology (KO) [BR:
sur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sur03019
]
STAUR_5244
Messenger RNA biogenesis [BR:
sur03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
STAUR_5244
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
ADO73015
UniProt:
Q08S97
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All DBs
Position
6493596..6495146
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AA seq
516 aa
AA seq
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MVVSAPTMTTDNSAGTPAPASEGGSVETVRKVYAKDLREKDRVHTVFRVTQKSKVTARSG
KVFLSLVLGDKSGEVDARIFDKVDTFEPAFAIGDHILVQGHIISFHGKTQLVVEALERLD
PGPLDLTEFEPPPAPPAPVAAEAAPQDTAPEKPAPAADKHEESAPDKRPAREEGAHGGSN
AGARAVGQIREIVTERIHDSYVKQLLLAFLDDPQLAAQLPIAPAGKGVHHAYRGGLAEHL
LSVMRLTLRVADHYPMADRDLLLAGALLHDVMKVAEISAEKGFDYTDEGKLVGHLVMSAQ
KIREKTLTIPGFPPLLEHHLTHLVLAHHGKLEYGSPKLPMTIEAYIVHALDTLDSRIASW
LEAMARDPNEKWTEPLKIYEQRQLWKAPAPTSRGKPPVEGRRKTREERRKPKGQGGAAAQ
GQAPATEAPSHPPRKERPPRPPREERGPREERGPREERPPREGRPPREERPPRPPRDPNS
LPQELTFKPFSALTTLAPAPAESSHGKPEDNSSTEG
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggtagtgtccgcgcccacgatgacgaccgacaattccgctggtacccccgcccccgcc
tccgagggcggctccgtcgagaccgttcgcaaggtgtacgcgaaggatctgcgcgagaag
gaccgcgtccataccgttttccgcgtcacgcagaagagcaaggtgacggcgcgcagtggc
aaggtgttcctctccttggtgctgggcgacaagagtggcgaggtggacgcccgcatcttc
gacaaggtggacactttcgagcccgccttcgccatcggagaccacatcctggtccagggc
cacatcatcagcttccacgggaagacccagctggtggtggaggcgctggagcgcttggac
ccgggaccgctggacctcacggagttcgagccccctccggccccgcccgcgcccgtcgcg
gccgaggcagctccccaggacacggccccggagaagcccgctccggccgcggacaagcac
gaggagagcgctcctgacaagcggcccgcccgggaagagggcgcccatggcggctccaac
gccggcgcccgcgccgtggggcagatccgcgagatcgtcaccgagcggatccatgattcg
tacgtgaagcaactgctgctggcgttcctggacgatccccagctcgccgcccagctgccc
atcgcccccgccggcaagggcgttcaccacgcctaccggggcggcctggccgagcacctg
ctgtcggtgatgcgtttgacgctgcgcgtcgcggaccactaccccatggcggaccgggac
ctgctcttggccggtgccctgctgcacgacgtgatgaaggtggcggagatctccgccgag
aagggcttcgactacaccgacgagggcaagctggtcggccacctggtgatgtcggcgcag
aagatccgggagaagaccctgaccatccccggcttcccgcccctgctcgagcaccacctc
acccacctggtgctcgcccaccacggcaagctggagtacggctcgcccaagctgcccatg
acgatcgaggcatacatcgtccacgccctcgacacgctggactcgcggatcgcctcctgg
ctggaggccatggcgcgagacccgaacgagaagtggacggagccgctcaagatctacgag
cagcgccagctctggaaggcgcctgcccccacctcgcggggcaagccgccggtggaaggc
cgccgcaagacgcgcgaggagcgccgcaagcccaagggccagggaggcgccgccgcccag
ggccaggctccagccaccgaggccccctcccatccgccccgaaaggagcgtcctccccgg
ccgccccgcgaggagcgcggcccccgggaagagcgtggccctcgggaggagcgtcctccc
cgcgaaggccggccgccccgcgaggagcgtcctccccggccgccccgcgacccgaacagc
ctgccccaagagctcaccttcaagccgttcagcgccctgaccacgctggcccccgccccc
gctgagtcctcccacggcaagcccgaggacaacagctccacggaaggatga
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