Stigmatella aurantiaca: STAUR_5281
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Entry
STAUR_5281 CDS
T01425
Symbol
dbpA
Name
(GenBank) ATP-independent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
sur
Stigmatella aurantiaca
Brite
KEGG Orthology (KO) [BR:
sur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sur03009
]
STAUR_5281 (dbpA)
Enzymes [BR:
sur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
STAUR_5281 (dbpA)
Ribosome biogenesis [BR:
sur03009
]
Prokaryotic type
rRNA helicases
STAUR_5281 (dbpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
ADO73052
UniProt:
Q099Y6
LinkDB
All DBs
Position
complement(6539498..6540877)
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AA seq
459 aa
AA seq
DB search
MDFAGLALSPPLLQVLAELGFTTATPIQAQSIPVLLQGRDLVGQAQTGSGKTAAFALPLL
EKVQPARRRLQALVLCPTRELCAQVAGEIRRLGRRLPGLQVLVLSGGQPIRPQLDALGKG
AHIAVGTPGRVLDLLDREALDTGQLATVVLDEADRMLDMGFREDMERILGAVPPSRQTVL
FSATFPPTIEAMSRAFQKEPARVTVAEAGVAPDIQQLCFTCGPHEKTQLLLRILRHYQPA
SAIVFCNLKATVTELTQMLVDAGVSADGLQGDLEQSDRDRVMAKFRNHSTRVLVATDVAG
RGIDVEALDAVINFDVPSQPEPYVHRIGRTGRAGRRGLAISLATPRDTQKIEDIEQATGV
KQERMSEEVLPPAAGGSPLASAWETLSISAGRKDKMRPGDILGALTGEAGGLSASDVGKI
EIQDRWSYVAVSKAVARVAFQRLSEGRIKGRKHRIERVR
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggactttgctggactcgccctctctccgccgctgctgcaggttctcgcggagctgggg
ttcacgaccgccacacccattcaagcccagagcatccccgtgctgttgcaggggcgtgat
ctcgtggggcaggcccagacggggagcgggaagacggcggcgttcgcacttcccctcttg
gagaaagttcagcctgcgcggcggaggcttcaggcactcgtgctgtgcccaacgcgggag
ctctgtgcacaggtcgcgggagaaatccgccgcctgggacggagattgcctggcctgcag
gtgctcgtcctctcggggggccagcccatccggcctcagctggacgcgctcggcaagggc
gcccacatcgccgtcggcacgcctggccgggtgctggacctgctcgatcgggaagcactc
gacacggggcaactcgccaccgtggtgctcgacgaagccgaccggatgctcgacatgggc
ttccgggaggacatggagcgcatcctgggggcggtccccccgtcgcgccagaccgtgctc
ttctcggcgacgttcccgcccaccatcgaggcgatgagccgtgcgtttcaaaaagagccc
gcgcgcgtgacggtcgccgaggccggggtggctcccgatatccagcagctctgcttcacg
tgtgggccccacgagaagacgcagctcctgctgcggatcctgcggcactatcagcccgcc
tccgccatcgttttctgcaacctcaaggcgacggtcaccgagctgacgcagatgttggtc
gatgcgggggtgagcgcggacggtctccagggagatttggagcagagcgatcgtgatcgc
gtcatggcgaagttccgcaaccacagcacccgtgttctcgtcgccacggatgtggcggga
cggggcatcgacgtggaagccttggatgccgtcatcaacttcgatgtgccctcacagccg
gagccctatgtgcaccgcattggccgcacagggcgcgcggggaggagggggctggccatc
tccctggccaccccgcgagacacgcagaagatcgaggacatcgagcaggccacgggcgtg
aagcaggagcgcatgagcgaagaggtgctgcctccggcggcaggaggctccccgctggcc
tccgcctgggagacgctctccatctccgcgggccgcaaggacaagatgaggccaggggac
atcctgggggcgctgaccggagaggctggagggctgagcgcctccgacgtgggcaagatc
gagatccaggaccggtggtcctatgtcgccgtctccaaggccgtcgcacgtgtcgcgttc
cagcggctgagcgagggccggatcaagggacgcaaacaccggatcgaacgggtgcgatag
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