Stigmatella aurantiaca: STAUR_5616
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Entry
STAUR_5616 CDS
T01425
Symbol
glyA
Name
(GenBank) Serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sur
Stigmatella aurantiaca
Pathway
sur00260
Glycine, serine and threonine metabolism
sur00460
Cyanoamino acid metabolism
sur00630
Glyoxylate and dicarboxylate metabolism
sur00670
One carbon pool by folate
sur00680
Methane metabolism
sur01100
Metabolic pathways
sur01110
Biosynthesis of secondary metabolites
sur01120
Microbial metabolism in diverse environments
sur01200
Carbon metabolism
sur01230
Biosynthesis of amino acids
sur01240
Biosynthesis of cofactors
sur04981
Folate transport and metabolism
Module
sur_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
sur00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
STAUR_5616 (glyA)
09102 Energy metabolism
00680 Methane metabolism
STAUR_5616 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
STAUR_5616 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
STAUR_5616 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
STAUR_5616 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
STAUR_5616 (glyA)
Enzymes [BR:
sur01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
STAUR_5616 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
ADO73381
UniProt:
E3FU62
LinkDB
All DBs
Position
complement(6936182..6937438)
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AA seq
418 aa
AA seq
DB search
MENTRTLAEVDPEIAQVIRQETQRQEEGIELIASENFVSPAVLEAVGSTLTNKYAEGYPG
KRYYGGCEVVDVAESLAIQRARDLFGAEAANVQAHSGSQANMAAYMALMKPGDTLLSLDL
NSGGHLTHGAAFNFSGKLYKVVHYGLTRDTETIDFAQVASLAKEHKPKVIVVGASAYPRT
LDFGKFREIADSVGAAMMVDMAHIAGLVAAGVHPSPVPLAEFVTSTTHKTLRGPRGGLVL
CREQFAKPLNSQIFPGIQGGPLMHVIAAKAVAFKEALTPEFKVYQRQIVSNAQALAEALL
RAGLRLCSGGTDNHLMLVDLRAKKITGKDAEAVMGKAGFTVNKNMIPFDPEKPVTTSGIR
VGTPAVTTRGMKEPEMAIIGQLIGEALDHASDEARLSRIHGQVKELTKSFPLYASRLR
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatacccgcacgctggccgaggtcgatcccgagatcgcccaggtcatccgccag
gagacgcagcgccaggaggaaggcatcgagctgattgcctcggagaacttcgtcagcccc
gccgtgctcgaggcagtgggttccacgctgacgaacaagtacgccgagggctaccccggc
aagcgctactacggcgggtgcgaggtggtcgacgtggcggagtcgctggcgatccagcgc
gcccgggatctgttcggggccgaggccgccaacgtccaggcccactccggcagccaggcc
aacatggccgcctacatggccctgatgaagccgggggacaccctcttgtccctggacctc
aactcgggcggccacctcacccacggcgcggccttcaacttctccggcaagctctacaag
gtggtccactatgggctcacccgggacacggagaccatcgacttcgcccaggtggcgagc
ttggccaaggagcacaagcccaaggtcatcgtcgtgggcgcgagcgcctacccgcgcacg
ctcgatttcggcaagttccgcgagatcgccgacagcgtgggcgcggcgatgatggtggac
atggcgcacatcgccggcctggtggccgcgggggttcacccgtcgcccgtgcccctggcg
gagttcgtcacctccaccacgcacaagacgctccgggggcctcggggcgggctcgtcctg
tgccgtgagcagttcgccaagccgctcaacagccagatcttccccggcatccagggcggg
ccgctgatgcacgtcatcgccgccaaggccgtggcgttcaaggaggccctcacccctgaa
ttcaaggtgtaccagcggcagatcgtctccaatgcccaggcgctggcggaggcgctcctg
cgggcagggctgcgcctgtgctccggcgggacggacaaccacctgatgctggtggacctg
cgcgccaagaagatcaccggcaaggacgccgaggcggtgatgggcaaggcgggcttcacc
gtgaacaagaacatgattccgttcgatcccgagaagccggtgacgacctcgggcatccgg
gtgggcacgccggccgtcaccacgcggggaatgaaggagccggagatggccatcatcggt
cagctcatcggcgaggcgctggaccatgcctcggacgaggctcggctctcccgcatccat
ggacaggtgaaggagctgacgaagtcctttccgctctacgcctcgcgcttgaggtaa
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