Stigmatella aurantiaca: STAUR_5641
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Entry
STAUR_5641 CDS
T01425
Symbol
ffh
Name
(GenBank) Signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
sur
Stigmatella aurantiaca
Pathway
sur02024
Quorum sensing
sur03060
Protein export
sur03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
sur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
STAUR_5641 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
STAUR_5641 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
STAUR_5641 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sur02044
]
STAUR_5641 (ffh)
Enzymes [BR:
sur01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
STAUR_5641 (ffh)
Secretion system [BR:
sur02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
STAUR_5641 (ffh)
Eukaryotic Sec-SRP protein
STAUR_5641 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
cobW
CbiA
CLP1_P
AAA_22
AAA_33
NodS
AAA_31
Zeta_toxin
AAA_28
ATP_bind_1
ParA
Thymidylate_kin
AAA_16
APS_kinase
nSTAND3
AAA_18
Motif
Other DBs
NCBI-ProteinID:
ADO73404
UniProt:
E3FU85
LinkDB
All DBs
Position
6958080..6959714
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AA seq
544 aa
AA seq
DB search
MLETVTKGFRSAKNRLAGKSELTPELVDESLRDIRVSLLEADVSFDVVKKFVSRVREKAV
GEVVQTTITDKSGQKRKVSPADYFVKVCHDELEALMGPVDTSLKLKPRGQLSGIMMVGLQ
GSGKTTTTGKLANRLLQEGRKPLLVAADIYRPAAVDQLKVLGERLKVPVYFEPGVAPPEL
AVRGYAAAREQKCDVVLIDTAGRLAIDESLMAELESIKGNVHPDNILLVCDAMIGQDAVR
TAAEFDRRLTLDGFILTKLDGDARGGAALSIKEVTGKPIKFLGMGESMDKLEEFRPEGLA
GRILGFGDIVGLMKDFEKVVDEKRAEEDALKLLSGNFSMKDFVEQIRMVRKMGPLKDLLE
KFPLFGELTEQLNPDEKELTKIEAMYDSMTEKERLRPDLINASRINRISKGSGRKPEDVR
DLLQKFGMMQQVMGTIGQNPGLLGRIPGFKQLGQLSQLKNMDLSGVLGKDKMLQQAMSGM
GGMPMQLPQIAPGYTAPMGQAAMAKARLMGYAPPASSGKTEDRDAIKERRKREKANKKKN
RKKK
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgctagagaccgtcaccaagggattccgttccgccaagaaccgcctcgcgggcaagagc
gagctcaccccagagttggtggatgagtccctccgcgacatccgcgtctcccttctcgag
gcggacgtctcgttcgacgtggtgaagaagttcgtctcccgcgtccgcgagaaggcggtg
ggagaagtggtgcagacgaccatcaccgacaagagcggccagaagcgcaaggtcagcccc
gcggactacttcgtcaaggtgtgccacgacgaactcgaggccctcatggggccggtggac
accagcctcaagctcaagccccggggccagctgagcggcatcatgatggtgggcctgcaa
ggctccggaaagacgaccacgacgggcaagctggccaaccggctgctccaggaaggacgc
aagcccctgctggtggccgccgacatctaccgtcccgcggccgtggaccagctcaaggtg
ttgggggaacggctcaaggtccccgtgtacttcgagcccggcgtggcgcccccggagttg
gccgtgcgcgggtacgccgcggcgcgggagcagaagtgcgatgtggtgctcatcgacacg
gccggccggctcgcgatcgacgagtccttgatggccgagttggagtccatcaagggcaac
gtccacccggacaacatcctactcgtctgcgacgcgatgatcggccaggacgccgtgcgg
acggcggccgagttcgatcggcggttgacgctcgacggcttcatcctcacgaagctggac
ggcgatgcgcgcggtggcgcggcgctgtccatcaaggaggtcaccggcaagcccatcaag
ttcctgggcatgggcgagtcgatggacaagctcgaggagttccggccggaagggcttgcg
ggccgcatcctgggctttggcgacatcgtcggcctgatgaaggacttcgagaaggtcgtc
gacgagaagcgggccgaggaggacgcgctcaagctgctgtccggcaacttctcgatgaag
gacttcgtcgagcagatccgcatggtgcggaagatgggcccgctgaaggatctgctggag
aagttcccgttgttcggggaactgaccgagcagctcaaccctgatgagaaggaactcacg
aagatcgaggcgatgtacgactcgatgacggaaaaggagcgcctgcgtccggatctgatc
aacgccagccggatcaaccgcatctcgaagggcagcgggcgcaagccagaggacgtgcgc
gacctgctgcagaagttcgggatgatgcagcaggtgatggggacgattggccagaaccca
ggactgctcggacgcatccccggcttcaagcagttgggccagctctcccagctcaagaac
atggacctgtcgggcgtgctggggaaggacaagatgctgcaacaggccatgagcgggatg
gggggcatgcccatgcaactgccgcagatcgcgcctgggtacacggcccccatgggacaa
gccgcgatggccaaggcccgcctgatgggctacgcgccgcctgcgtcgagcggcaagacc
gaggaccgcgacgccatcaaggaacggcgcaagcgcgaaaaggccaacaagaagaagaac
cgcaagaagaagtag
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integrated database retrieval system
