Stigmatella aurantiaca: STAUR_5778
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Entry
STAUR_5778 CDS
T01425
Name
(GenBank) RNA polymerase sigma-70 factor, ECF subfamily
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
sur
Stigmatella aurantiaca
Brite
KEGG Orthology (KO) [BR:
sur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sur03021
]
STAUR_5778
Transcription machinery [BR:
sur03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
STAUR_5778
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
HTH_30
HTH_8
Sigma70_ECF
Sigma70_r4_2
Sigma70_r4
HTH_28
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ADO73540
UniProt:
Q08UA6
LinkDB
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Position
complement(7126234..7126830)
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AA seq
198 aa
AA seq
DB search
MRVETENALYSGLGAEREELWLAEFHEGHRPALERCYRELYPTVQRAVGRVLQGADQETV
IHEVFYRLISREELRRSFRGGSLKAWMATVAYHLALDYVRRQQREQGALEQSGGLGGQEA
TEGREFSEQSDARMLVERFQRECLPAKWHGVFEARFLRQLPQRDAARELGIHRTTLAYQE
MRIRALLKRFLLREGDTP
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
gtgcgggtggaaaccgaaaatgcgctctattccggcctcggcgcggaacgcgaggagctc
tggctggccgagttccacgaagggcaccgccccgccctggagcggtgctaccgggaactc
taccccacggtgcagcgcgccgtgggccgcgtgctgcagggagccgatcaggagaccgtc
attcacgaggtcttctatcgattgatttcccgcgaggagttgcgccgcagcttccggggc
ggctccctcaaggcctggatggccaccgtggcctaccacctggcgctcgattacgtgcgg
cgccagcagcgtgagcaaggcgccctggaacagtcgggtgggctcggaggacaggaagcc
accgagggccgggagttctccgagcagagcgatgcgcggatgctcgtcgagcgtttccag
cgcgagtgtttgcccgccaagtggcatggcgtcttcgaggcccgcttcctgcggcaactg
ccccaacgggatgcggcccgggagctgggcatccaccggaccacgctggcctaccaagag
atgcgcattcgcgcgctgctcaagcgtttcctcctgcgcgaaggggatacaccatga
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