Stigmatella aurantiaca: STAUR_5805
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Entry
STAUR_5805 CDS
T01425
Symbol
rtcR
Name
(GenBank) Sigma-54 dependent transcriptional regulator RtcR
KO
K14414
transcriptional regulatory protein RtcR
Organism
sur
Stigmatella aurantiaca
Brite
KEGG Orthology (KO) [BR:
sur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sur03000
]
STAUR_5805 (rtcR)
Transcription factors [BR:
sur03000
]
Prokaryotic type
Other transcription factors
Others
STAUR_5805 (rtcR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA_5
Mg_chelatase
AAA
AAA_16
AAA_22
NACHT
AAA_19
T2SSE
AAA_30
ATPase_2
MCM
AAA_14
AAA_2
AAA_7
AAA_29
AAA_18
NTPase_1
ABC_tran
AAA_33
TniB
Motif
Other DBs
NCBI-ProteinID:
ADO73567
UniProt:
E3FXF4
LinkDB
All DBs
Position
7156524..7158158
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AA seq
544 aa
AA seq
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MAKTQARRTVVLGMLGTMLDGGQGPRRWERWRPTVALCQQDDLLVDRLELLYSPNAAVLA
ATVTEDIHQVSADTQVRGVEVDIQDPWDLEEVYGALLDYARSYPFQPEQEDYLVHITTGT
HIVQICMFLLVESRHIPARLVQTAPPSGRDRGPGKYSIIDLDLSKHDRLATRFQQEQREG
LSFLKAGIDTRNAAFNQLIARIEQVAIRSRAPLLITGPTGAGKSQLARRIYALKKARRQV
NGPFVDLNCATLRGDAAMSALFGHVKGAFTGALSDRPGLLRQANGGVLFLDEIGELGADE
QAMLLRAVEDKRFLPVGSDKEVESDFQLIAGTNRDLQAEVARGAFREDLLARINLWTFQL
PALRERPEDIPPNLLYELDQASQALDTRVTMNREAQEHFLRFATSPAARWSGNFRDLNAA
VLRMATLAPGGRITRENVDEEQERLRAQWRQGPPPGPGATEDPVQEVLGAAIAAELDRFD
RVQLADVLTVCRHSRSLSEAGRHLFARSRERKQSPNDADRLRKYLARFGLAWGDVSRGGS
PEAP
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagactcaggcgcgaaggaccgtggtcctcgggatgctcgggacgatgctcgac
gggggccaagggccccggcggtgggagcggtggcgtcccaccgtggcgctgtgccagcag
gacgacctgctcgtggaccggctggagctcctctattcccccaacgctgcggtgctcgcc
gccacggtgacggaggacatccatcaggtgtccgcggacacgcaggtgcgcggcgtggag
gtggacatccaggacccgtgggatttggaggaggtgtatggggccctgctcgactatgcc
cggagctaccccttccaacccgagcaggaggactacctcgtccacatcaccaccgggacg
cacatcgtgcagatctgcatgttcctgctggtggagagccggcacatccccgcgcggctg
gtccagacggccccgccctcgggccgggaccgaggccccggcaagtacagcatcatcgat
ctggatctctccaagcacgaccggctggccacgcgcttccagcaagagcagcgcgagggg
ctgtccttcctcaaggcgggcatcgacacgcgcaacgccgcgttcaaccagctcatcgcg
cgcatcgagcaggtggccatccgctcccgcgccccgctgctcatcaccggccccacgggg
gcgggcaaatctcagctcgcgcggcgcatctacgccctgaagaaggcccggcggcaggtg
aatggccccttcgtggacctcaactgcgccacgctccggggagatgccgccatgtccgcc
ctcttcggccacgtgaagggcgccttcaccggggccttgagtgaccggcccgggctgctg
cgacaggcgaacgggggcgtcctgttcctggatgagattggcgagttgggcgcggacgag
caggccatgctgctgcgggccgtggaggacaaacgcttcctgcccgtgggctcggacaag
gaggtggagagcgacttccagctcatcgccggcacgaaccgggatctgcaagccgaggtg
gcgcggggggccttccgggaggacctgctggcgcgcatcaacctgtggacgttccagctg
cccgccctgcgcgagcgccccgaggacatcccccccaacctgctctacgagctggatcaa
gcctcccaggccctggacacccgggtgacgatgaaccgggaggcccaggagcacttcctg
cgcttcgccacctcccccgcggcgcgctggagcggcaacttccgcgacctgaacgcggcg
gtgctgcgcatggccaccctggccccagggggccgcatcactcgggagaacgtggacgag
gagcaggaacggctccgagcccagtggcgccagggcccccccccgggcccgggggcaaca
gaggatcccgtccaagaggtgctcggggcggccatcgcggcggagctggaccggttcgac
cgggtgcagctcgcggatgtgctcaccgtgtgccggcactcccgctcactgtcagaagcc
ggacggcacctgtttgcccgctcccgcgaacgcaagcagagccccaatgacgcggaccgc
ctccgcaagtaccttgcccgcttcgggctggcctggggggatgtgagccgcggcggctcc
ccggaggccccttga
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