Stigmatella aurantiaca: STAUR_5865
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Entry
STAUR_5865 CDS
T01425
Name
(GenBank) DNA-binding regulatory protein
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
sur
Stigmatella aurantiaca
Brite
KEGG Orthology (KO) [BR:
sur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sur03021
]
STAUR_5865
Transcription machinery [BR:
sur03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
STAUR_5865
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
HTH_Tnp_4
Sigma70_ECF
UPF0122
DUF1804
Motif
Other DBs
NCBI-ProteinID:
ADO73626
UniProt:
E3FYZ1
LinkDB
All DBs
Position
complement(7224269..7225183)
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AA seq
304 aa
AA seq
DB search
MVEPFTLATTFLKNAPVRMTGADEMAGLEAVLRRTWDNARAAWPGVDLPAEVFVRHLSMR
LSSQELGGPLALLLEHLVLADLYIACACVNGVAGAIEALEQHYLGKLPHALAYLRLPEQI
LDEVCQSVRIHLLVGTAESRPRLGEYTGRGALLSWIRVIAVRMALKQGGVGREAPEENVM
TLIEAFSEPSSNAEIDLIKRRYRKEFRQAVRDAFSALSDDQRHLLRLHFIDRLSTIEMGP
LFQVNQSTISRWIKSARQTVYEGTKSRLQERLRLSTREFESLLAEIESQMDVGLSQVLDD
GDGT
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggtggagccgttcactctcgccacaacattcctcaagaatgccccggttcgaatgacc
ggcgccgatgagatggctgggcttgaggctgtgttgaggcgcacttgggacaacgcccgt
gcggcgtggccgggagtggatttgccggcggaggtctttgtccgccatctgtcgatgagg
ctttccagccaggagttgggagggccgctcgctctcttgctcgagcacctggtgctggcg
gatctctacatcgcgtgtgcctgtgtgaatggcgtggcgggggcgatcgaagcgttggag
cagcactacctgggcaagttgccgcacgcgctggcgtatctcagactgcccgagcaaatc
ctggacgaggtctgccagagcgtgcgcatccacctgctggtggggacggccgaatcgaga
ccccggctcggggagtacacgggccgcggggcactgctgagctggatccgggtcatcgcg
gtgcgcatggccctcaaacagggaggcgtgggccgggaggcacccgaagagaacgtgatg
accctcatcgaggccttctccgagcccagctccaacgccgagatcgacctcatcaagcgg
cgctaccgcaaggagttccgtcaggccgtgcgcgatgccttctcggccttgtcagacgat
cagcggcacttgctgcgtctgcatttcatcgatcgcctgtcgaccatcgagatggggccc
ctcttccaagtcaaccaatcgaccatttcgcgctggatcaagagcgcccggcaaaccgtg
tacgaggggaccaagagccgcttgcaggagcggctccggttgtcgacacgcgagttcgag
agcctcctggccgagatcgaaagccagatggacgtggggctcagccaggtgctggacgac
ggggatgggacgtag
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