Stigmatella aurantiaca: STAUR_6188
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Entry
STAUR_6188 CDS
T01425
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sur
Stigmatella aurantiaca
Pathway
sur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
STAUR_6188 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sur03019
]
STAUR_6188 (pnp)
03016 Transfer RNA biogenesis [BR:
sur03016
]
STAUR_6188 (pnp)
Enzymes [BR:
sur01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
STAUR_6188 (pnp)
Messenger RNA biogenesis [BR:
sur03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
STAUR_6188 (pnp)
Transfer RNA biogenesis [BR:
sur03016
]
Prokaryotic type
tRNA degradation factors
STAUR_6188 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
ADO73945
UniProt:
Q09BU7
LinkDB
All DBs
Position
complement(7600350..7602773)
Genome browser
AA seq
807 aa
AA seq
DB search
MAGGFGFRSKRLTPGGPPRSGIKSSAASLRRDPRRPLCSQAAVARFRLSQARRPLITQGP
PGRGLPSRVRGGTRRRRPSGSKGKDMLKKSVKIGDSELSIEVGRLAKQADGAVVVRYGDT
MLLVTAVSAREKKDVDFLPLTVEYQEKLYSAGRIPGSYFKREGRLTEKETLASRLVDRSC
RPLFPDGYAYETQIIASVVSAEPENEGDIHGITGASAALWVSDIPFNGPIAGIRVGRVDG
KFVANPTLKQREQSDIDLVMAVSREAIVMVEGGAEEVSEADMVAALEFGKQAVQPALDIQ
DELRRELGKTVRSYEKLASIDEGLKAKVRELAWDGIVKGYGIKEKAARYESLGKAKKEAI
AKLKEQLGDAYTPAVEKHAKQVVEDLKYEHMRQLTVDGGRIGARGHAEVRSITCEVGVLP
RTHGSAVFTRGETQALVVTTLGTSEDEQRLELLGGMVFKRFMLHYNFPPFSVNETKPLRG
PGRREVGHGALAERALRNMAPKSDSFPYTIRVVSDILESNGSSSMASVCGGTLALMDAGV
PIKAPVAGIAMGLVKEGDKVAILSDILGDEDHLGDMDFKVCGTSKGITSIQMDIKITGLT
TEIMSRALEQARQGRIHILGEMLKTMAEPRKEISQYAPRITTIQIRPEYIKNVIGPGGKV
IKDIIARTGAAINIEDSGRVDIASANSDSVKSAIAMIQALTREAEIGKIYTGTVRKIAEF
GAFVELFPGTDGLIHISELSDKRVKSVSDVLKEGDEVLVKVVSIDKTGKIRLSRKEAMAE
RAAAQQQQQTPPPGDGAPSATQPDAKA
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
gtggctggaggttttggtttccgttcgaagaggctgacccccggtgggcctcctcgatca
gggatcaaaagttccgctgcatccctccggcgcgaccccaggcgccctctgtgcagtcag
gctgcggttgcccgattccgcctgtcccaggcccggcgaccgctcatcacccaaggccct
ccggggcgtggactcccctcgcgggtgcgaggcggaacgcgccggaggaggccttcagga
agcaaaggcaaggacatgctgaagaagagcgtcaagattggtgacagtgagttgagcatc
gaagtgggccgtctggccaagcaggccgatggcgccgtcgtggtgcgttacggcgacacg
atgctgctggtgacggcggtgagcgcgcgcgagaagaaggacgtcgacttcctgccgctc
acggtggagtaccaggagaagctgtactcggcgggccgcatccctggcagctacttcaag
cgcgagggccgcctcaccgagaaggagacgctggccagccggctggtggaccgctcctgc
cgtccgctgttcccggatggctatgcgtacgagacgcagatcatcgccagcgtcgtctcc
gcggagccggagaacgagggcgacattcacggcatcaccggcgcctcggcggcgctgtgg
gtctcggacatcccgttcaacggccccatcgctggcatccgcgtgggccgcgtggacggc
aagttcgtggccaaccccacgctcaagcagcgcgagcagagcgacatcgacctggtcatg
gcggtgagccgcgaggccatcgtgatggtggaagggggcgccgaggaagtgagcgaggcg
gacatggtggccgcgctcgagttcggcaagcaggccgttcagcccgccctggacatccag
gacgagctgcgccgcgagctgggcaagacggtgcgctcgtacgagaagctggcctccatc
gacgaggggctcaaggccaaggtgcgcgagctggcctgggacggcatcgtcaagggctac
ggcatcaaggagaaggcggcccgctacgagtcgctcggcaaggcgaagaaggaggccatc
gccaagctcaaggagcagctcggtgatgcctacacccctgcggtggagaagcacgccaag
caggtggtggaggacctgaagtacgagcacatgcgccagctcaccgtggacgggggccgc
attggcgcccgcggccatgccgaggtgcggtcgatcacctgcgaggtgggcgtgctgccg
cgcacccacggcagcgcggtgttcacccgtggcgagacgcaggcgctcgtggtgacgacg
ctgggcaccagcgaggacgagcagcggctggagctcctgggcggcatggtcttcaagcgc
ttcatgctgcactacaacttccccccgttcagcgtgaacgagacgaagcccctgcgcggc
ccgggccggcgcgaggtgggccacggtgccctggccgagcgcgccctgcgcaacatggcg
cccaagagcgacagcttcccgtacaccatccgcgtggtgtcggacatcctggagtccaac
ggctcttcgtccatggcctcggtgtgcggtggcaccctggcgctgatggacgcgggtgtt
cccatcaaggccccggtggccggcatcgccatgggtctcgtgaaggagggcgacaaggtc
gccatcctttcggacatcctcggggacgaggaccacctgggcgacatggacttcaaggtg
tgcggcacctcgaagggcatcacctccatccagatggacatcaagatcaccggcctcacc
acggagatcatgagccgcgcgctggagcaggcgcgtcagggccgcatccacatcctgggc
gagatgctcaagacgatggcggagccgcgcaaggagatcagccagtacgcgccgcgcatc
accaccatccagatccgtcccgagtacatcaagaacgtcatcgggccgggcggcaaggtc
atcaaggacatcatcgcgcgcacgggcgcggcgattaacatcgaggactcgggccgcgtg
gacatcgccagcgcgaactcggactcggtgaagtccgccatcgcgatgatccaggcgctc
acgcgcgaggccgagatcgggaagatctacaccggcacggtgcggaagatcgccgagttc
ggcgccttcgtggagctgttcccgggcaccgacggcctcatccacatctccgagctgtcc
gacaagcgcgtcaagagcgtctcggatgtgctgaaggagggggatgaggtgctggtgaag
gtcgtcagcatcgacaagacgggcaagatccgcctgtcgcgcaaggaggcgatggccgag
cgcgccgccgcccagcagcagcagcagacgccgcctccgggcgatggggccccctcggcc
acccagccggacgcgaaggcctaa
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