Stigmatella aurantiaca: STAUR_6323
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Entry
STAUR_6323 CDS
T01425
Symbol
ihfB
Name
(GenBank) Integration host factor, beta subunit
KO
K05788
integration host factor subunit beta
Organism
sur
Stigmatella aurantiaca
Brite
KEGG Orthology (KO) [BR:
sur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sur03032
]
STAUR_6323 (ihfB)
03036 Chromosome and associated proteins [BR:
sur03036
]
STAUR_6323 (ihfB)
03400 DNA repair and recombination proteins [BR:
sur03400
]
STAUR_6323 (ihfB)
DNA replication proteins [BR:
sur03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
STAUR_6323 (ihfB)
Chromosome and associated proteins [BR:
sur03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
STAUR_6323 (ihfB)
DNA repair and recombination proteins [BR:
sur03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
STAUR_6323 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_bac_2
HU-HIG
HTH_78
Motif
Other DBs
NCBI-ProteinID:
ADO74080
UniProt:
Q08NJ4
LinkDB
All DBs
Position
7763050..7763391
Genome browser
AA seq
113 aa
AA seq
DB search
MLKSDLINILVTKRGVTQKQAEATVETIFESMKEALCRGENIEIRGLGAFHVKNYQGYQG
RNPKTGQVIPVKPKRGLLFRTGKELRDRVNRPAAQSAQPDLSDPSKGNSGTGT
NT seq
342 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagtccgatctgatcaacattctcgtcaccaagcggggggtgacgcagaaacag
gccgaggccactgttgagacgatcttcgaatcgatgaaagaggcgctctgccgcggcgag
aacatcgagatccgcgggctgggtgcctttcacgtcaaaaactatcagggataccaaggc
cgcaaccccaagacgggccaggtcatcccggtgaagcccaagcgaggcttgctgtttcgc
acgggcaaggagctgagagaccgggtcaaccgcccggccgcccaatccgcccaaccggat
ctgtcggatccctccaagggcaacagcggcaccggaacctga
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