Stigmatella aurantiaca: STAUR_6511
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Entry
STAUR_6511 CDS
T01425
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sur
Stigmatella aurantiaca
Pathway
sur03030
DNA replication
sur03430
Mismatch repair
sur03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
STAUR_6511
03430 Mismatch repair
STAUR_6511
03440 Homologous recombination
STAUR_6511
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sur03032
]
STAUR_6511
03400 DNA repair and recombination proteins [BR:
sur03400
]
STAUR_6511
Enzymes [BR:
sur01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
STAUR_6511
DNA replication proteins [BR:
sur03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
STAUR_6511
DNA repair and recombination proteins [BR:
sur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
STAUR_6511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ADO74268
UniProt:
E3FLK4
LinkDB
All DBs
Position
complement(7974625..7978182)
Genome browser
AA seq
1185 aa
AA seq
DB search
MSFTHLHLHTLYSLLDGAIRMKDLIKTVKDKGMSSVAVTDHGNMFATIDFYKKAKDAGIK
PIIGMEAYVAGTKGREDRSEKVAHHLILVAQNAEGYANLRYLSSTAYMDGFYYHPRIDKK
VLAQHSKGLFALTACLGGEVTSACFRGDMDHARRAATEYKDIFEPGHFFLEVQSNGIPEQ
DKANENLKQLSRDLDIPLCATADAHYIKREDARAHELLMCIASGKTLSDGKRLRHSTDKL
YVTSPQEMLEFFRDTPEAVHNTQVIADQCNLELKLGKPMLPTFKVPDSHTPDSFMAELAF
EGLHERFKELHHAGAKFDPEMYRARLNLELNVIQKMGFSGYFLIVQDFINWAKKANIPVG
PGRGSGAGSLVAYALRITDLDPLPYNLLFERFLNPERVSMPDFDIDFCQDRRDEVIKYVS
QKYGEMNVGQIITFGSLKAKSVLRDVCRVFGLPFSEGDRIAKLVPEVLGITLKEAIEQEA
RLKEMMEKPSNVGEVEGKPVTTKDVLEIALALEGLHRQPGMHAAGVVIADKPLWEFVPVY
QPPGEKTLITQFAKDEVEAAGLVKFDFLGLKTLTVIQNALDLINRNPPNGKKLERQDIPL
HDELMWKLMADGDTAGVFQMESSGFTEMVMKLKPSCFEDVIAAGALYRPGPLDSGMVDVF
INRKHGREPVTYPHPALEPVLKDTYGVIVYQEQVMQISQVLGGYTLGRADLLRRAMGKKK
AEVMQAERAGFLEGCKKNNVDLKVAGEIFDLMEKFAEYGFNKSHSAAYGLITIHTAWLKA
HFPVEFMAALLTSEKDNTDKVVRHIGEAREAGHQVLPPDVNQSDMAFGAVDGKIRFGLGA
INGVGEGAIESIVEARKDGFFKGLFDFCERVDSRRVNKKVLEALVKAGAFDFEKRPRRQL
FETIERAMNRGSASQKDKAAGQSSLFGMLAGPAAGGGGGMKDDYAQVEEWPEKERLAFEK
DAIGFYVSGHPLHQYDKELKRYARPVTSVQRARRDEKITVGGIVAALRERPTKTGKRMAW
VTLEDLSGSIELVCFPGKEGGRSMMGKDGKWTKGGPKPGYENWETLLKGDDPILVSGTVQ
ISQRDEESPTAELIVEDIQSLKVVREKRTKRLELRVPADLLTEERLSKLTQLGKQYAGAT
PVAVSVLFPGEAEALIGGTALKVQVSDELLLAVDKLFGMRVVELG
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttacccatcttcacctgcacaccctgtactcacttctggatggggccatccgg
atgaaggacctcatcaagacggtgaaggacaaggggatgtcgagcgtggccgtgacggac
cacggcaacatgttcgccaccatcgacttctacaagaaggcgaaggatgccggcatcaag
cccatcatcggcatggaggcgtacgtcgccggcaccaagggccgcgaggaccgctcggag
aaggtcgcccaccacctcatcctggtggcccagaacgcggagggctacgcgaacctgcgc
tacctgtcgtccacggcctacatggacggcttctattaccacccgcgcatcgataagaag
gtgctggcccagcacagcaaggggctcttcgcgctcaccgcgtgtctgggcggcgaggtg
accagcgcgtgcttccgcggggacatggatcacgcccggcgcgcggccaccgagtacaag
gacatcttcgagccgggccacttcttcctcgaggtgcagtccaacggcatccccgagcag
gacaaggccaacgagaacctcaagcagctcagccgggatctcgacatcccgctgtgcgcc
accgcggacgcgcactacatcaagcgcgaggacgcgcgtgcgcacgagctgctcatgtgc
atcgccagcggcaagacgttgtcggatggcaagcgtctgcggcactccacggacaagctc
tacgtcacgagcccccaggagatgctggagttcttcagggacacccccgaggccgttcac
aacacccaggtcatcgccgatcagtgcaacctggagctcaagctgggcaagcccatgctg
cccaccttcaaggtgcccgacagccacaccccggacagcttcatggcggagctggccttc
gagggcctccacgagcgcttcaaggaactgcaccacgccggggccaagttcgacccggag
atgtaccgggcgcgcctcaacctggagctgaacgtcatccagaagatggggttcagcggc
tacttcctcatcgtccaggacttcatcaactgggccaagaaggccaacatccccgtgggg
ccgggccgtggctcgggcgcgggctccctggtcgcgtacgcgctgcgcatcaccgacctg
gatccgctgccctacaacctgcttttcgagcgcttcctcaaccccgagcgcgtgtcgatg
ccggacttcgatatcgacttctgccaggaccggcgcgacgaggtcatcaagtacgtctcg
cagaagtacggggagatgaacgtcgggcagatcatcaccttcggcagcttgaaggccaag
agcgtgctgcgcgacgtgtgccgtgtgttcggcctgcccttcagcgaaggcgaccgcatc
gccaagctcgtgcccgaagtgctcggcatcaccctgaaggaggccatcgagcaggaggcc
cgcctcaaggagatgatggagaagccctcgaacgtcggcgaggtggagggcaagccggtc
accaccaaggacgtgctggagatcgccctggcgctggaggggctgcaccgccagcccggc
atgcacgccgccggcgtcgtcatcgcggacaagccgctgtgggagttcgtccccgtctac
cagcctcccggtgagaagacgctcatcacccagttcgccaaggacgaggtggaggcggcg
ggcctggtgaagttcgacttccttggcctcaagacgctcaccgtcatccagaacgcgctg
gatctcatcaaccgcaacccgcccaacgggaagaagcttgagcggcaggacattcccctg
catgacgagctcatgtggaagctcatggccgatggcgacacggccggcgtcttccagatg
gagtcgagcggcttcaccgaaatggtgatgaagctcaagccgtcctgcttcgaagacgtc
atcgccgcgggcgcgctctaccggccgggtccgctggactccggcatggtggatgtcttc
atcaaccgcaagcacggccgcgagccggtgacgtatccgcaccccgccctggagccggtg
ctcaaggacacctacggcgtcatcgtgtaccaagagcaggtgatgcagatctcccaggtg
ctgggaggctacaccctgggccgcgcggacctgctccgccgcgcgatgggcaagaagaag
gccgaggtgatgcaggccgagcgcgccggcttcctggagggctgcaagaagaacaacgtc
gacctgaaggtggccggcgaaatcttcgacctgatggagaagttcgccgagtacggcttc
aacaagagccactcggccgcctacggcctcatcaccatccacacggcgtggctgaaggcg
cactttccggtggagttcatggccgcccttctcaccagcgagaaggacaacaccgacaag
gtggtgcggcacatcggcgaggcgcgcgaggcggggcaccaggtgctgccgccggacgtg
aaccagtcggacatggcctttggcgcggtggatgggaagatccgcttcgggctgggcgcc
atcaacggcgtgggcgagggcgccatcgaatccatcgtggaggcgcgcaaggacggcttc
ttcaaggggttgttcgacttctgcgagcgcgtggacagccgtcgcgtcaacaagaaggtg
ctggaggcgctggtcaaggccggcgccttcgacttcgagaagcgtccccggcgccagctc
ttcgagaccatcgagcgggccatgaaccggggctccgccagtcagaaggacaaggccgcc
gggcagagctcgttgttcgggatgctggcgggaccggccgcgggcggcggcgggggcatg
aaggacgactacgcgcaggtcgaggagtggcccgagaaggagcggctcgccttcgagaag
gacgccatcggcttctacgtgtccggtcacccgctgcaccagtacgacaaggagctgaag
cgctacgcccggcccgtcacctcggtgcagcgggcgcggcgcgacgagaaaatcaccgtg
ggcggcatcgtcgcggcgctgcgtgagcggccgacgaagacgggcaagcgcatggcgtgg
gtgacgctggaggacctgtcgggctccatcgagctggtgtgcttcccgggcaaggaggga
ggccgctcgatgatgggcaaggacggcaagtggaccaagggcgggcccaagccggggtac
gagaactgggagacgttgctcaagggggatgaccccatcctggtctcgggcacggtgcag
atcagccagcgcgacgaggagtcgcccacggcggagctcatcgtcgaggacatccagagc
ctcaaggtggtgcgcgagaagcgcacgaagcggctggagctgcgcgtgcccgcggacctg
ctcaccgaggagcggctgtccaagctgacgcagcttgggaagcagtacgccggggccacg
cccgtggcggtgagcgtgctgttccccggcgaggcggaggccctcatcggcggcacggcc
ctcaaggttcaggtgagcgacgagctgttgctggccgtggacaagctcttcggaatgagg
gtggtggagttggggtag
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integrated database retrieval system
