Stigmatella aurantiaca: STAUR_6886
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Entry
STAUR_6886 CDS
T01425
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sur
Stigmatella aurantiaca
Brite
KEGG Orthology (KO) [BR:
sur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sur03016
]
STAUR_6886 (truB)
Enzymes [BR:
sur01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
STAUR_6886 (truB)
Transfer RNA biogenesis [BR:
sur03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
STAUR_6886 (truB)
Prokaryotic type
STAUR_6886 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ADO74642
UniProt:
E3FUE4
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All DBs
Position
complement(8409453..8410367)
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AA seq
304 aa
AA seq
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MRDAPPLAPGIHLVHKPLGETSFSSVRAAMAELEAARPGKRVPVCHGGTLDPFAEGLLLL
LVGQATRLMDLLHAVPKHYVAQVIWGTETDTGDLLGRVVHAGDPSALTPGALEAALAGFR
GWQDQVPPATSAKKLGGEPAYRKAHRGEEVVLPPSRVYLHEARWRSHELPRSSQLELVCR
GGFYVRSLARELGRILGCGAHLARLHRTAIGPWEDPGPGRRMGLHGRQVLPWSALRELSD
AEVGELRRERPIALGRLLPPDWRLPPGFPDPEAPVRGFHLGRLVALLREQEGAFRMQMEL
RGGL
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
ttgagggacgcccctccgctggcccccggcattcacctcgtccacaagccgctgggggag
acgagcttctcctcggtgcgcgccgcgatggccgagctcgaggccgcgcgcccgggcaag
cgggtgcccgtgtgccatggcgggacgctggatccgttcgccgaagggttgctgctgctg
ctggtgggccaggccacgcggctcatggacctgctgcacgccgtgccgaagcactatgtg
gcgcaggtcatctggggcacggagacggacaccggggacttgttgggccgggtggtgcac
gcgggagatccctcggccctgacgcccggggcgctggaggcggcgctcgcgggcttccgg
ggctggcaggatcaggtgccgccagccaccagcgcgaagaagctcggcggagagcccgcc
taccgcaaggcccaccggggcgaggaggtggtgttgccgccctcgcgcgtctacctgcac
gaggcgcgttggcgctcccacgaactgccgcgctccagccagctggagctggtgtgccgg
gggggattctatgtgcgctccctggcccgagagctggggaggatccttggatgtggggct
cacctggcccggctgcaccgcacggccatcggcccctgggaggacccggggcctgggcgg
cgcatgggactgcacgggcgccaggtactgccctggagtgccctccgggagctctcggac
gcggaggtgggcgagctgcggcgggagcggcccattgccctggggcggctgctgcctccg
gactggcgtctgcccccgggctttccggatcccgaggcccccgtgcgcggcttccacctc
ggtcggctggtggcactcctgcgggagcaggagggcgccttccggatgcaaatggagctg
cgcggagggctctaa
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integrated database retrieval system
