Strix uralensis (Ural owl): 141940555
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Entry
141940555 CDS
T11361
Symbol
CPSF3
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3 isoform X1
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
sura Strix uralensis (Ural owl)
Pathway
sura03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sura00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
141940555 (CPSF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sura03021
]
141940555 (CPSF3)
03019 Messenger RNA biogenesis [BR:
sura03019
]
141940555 (CPSF3)
Transcription machinery [BR:
sura03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
141940555 (CPSF3)
Messenger RNA biogenesis [BR:
sura03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
141940555 (CPSF3)
U7-dependent histone pre-mRNA processing factors
141940555 (CPSF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
DUF1611
Motif
Other DBs
NCBI-GeneID:
141940555
NCBI-ProteinID:
XP_074717689
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All DBs
Position
3:complement(17488760..17508857)
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AA seq
647 aa
AA seq
DB search
MLDCGIHPGLEGMDALPYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTH
ATKAIYRWLLSDYVKVSNISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAG
HVLGAAMFMIEIAGVKLLYTGDFSRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREE
REARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKK
CMAVYQTYVNAMNDKIRKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLS
RELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHT
DYQQTSEFIRALKPPHVILVHGEQNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLN
FRGEKLAKVMGSLADKKPEQGQRISGILVKRNFNYHILSPCDLSNYTDLAMSTVTQTQAI
PYTGPFNLLYYQLQKLTGDVEEIEIQQKPALKVFKNITVIQEPGMVVLEWVANPANDMYA
DTVTTVILEVQSNPKIQKAAVHKISKKVDMDVYRKRMEIMLQDMFGEDCVSSKDGSVLCI
TVDGKTANISLDTRTVDCEPGSEDDESLREMVELAAQRLYDALSPVY
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgcttgactgtggaatccatcctggactggaaggaatggatgctcttccttacattgat
ttgatagatcctgctgagattgatctcctcctaattagtcatttccatttagatcactgt
ggggctttaccatggtttttgcagaaaacaagttttaaaggaaggacatttatgactcat
gccacaaaagctatttacagatggcttctttcagactatgtcaaagtcagtaatatatca
gcggatgacatgctatatacagaaacagacctcgaagaaagcatggacaagattgagacc
atcaacttccatgaagtgaaagaggtggcaggaatcaaattctggtgttaccacgcaggc
cacgttctgggagcagccatgtttatgattgaaatagctggtgtgaagcttttatataca
ggtgatttctcaagacaggaagacagacatctgatggcagctgagattcccaatattaaa
cccgatattcttataattgaatccacatatggtactcatattcacgaaaaaagggaagag
cgagaggcaagattctgtaatactgttcatgacattgtaaacagaggaggtagaggtctt
attcctgtgtttgccctgggtcgagctcaagaactacttttaattttagatgaatactgg
cagaatcatcctgaacttcatgacatccctatatactatgcctcctctttggcaaagaaa
tgtatggcagtttatcagacgtatgtcaatgccatgaatgacaaaatccgcaagcaaatt
aacatcaacaatccatttgttttcaagcacattagtaatctgaagagtatggatcatttt
gatgatattggcccaagtgttgtgatggcttccccaggcatgatgcagagtggcttatcc
agagagttgtttgagagctggtgcacagataagagaaatggagtaattatagcagggtac
tgtgttgaaggaacgcttgctaagcacattatgtctgagcctgaagagatcacaactatg
tcagggcaaaaactcccactgaagatgtctgtggattacatttctttctctgctcacaca
gattatcaacaaactagtgaatttatccgggccctgaaacctccacatgtgattttagtt
catggtgagcagaatgaaatggccagattgaaagcagcattgatacgggaatatgaggat
aatgatgaagttcatatagaagttcacaatcctaggaatactgaagctgtgacattaaac
ttcagaggagaaaagcttgccaaggtgatgggatctttagcagataagaaaccagagcaa
ggacagagaatttctggaattctagttaaaaggaattttaactatcacatcctttcacca
tgtgacctctccaattatacagacttggcgatgagcactgtaacacagacacaagccatt
ccatatacaggcccttttaatctgctttattatcagctacaaaagcttactggtgacgta
gaagaaatagaaatccagcaaaaaccggccctgaaggttttcaagaatattactgtgatc
caggaaccaggcatggtagtccttgagtgggtggcaaatcctgctaatgatatgtatgca
gacaccgtgacaacagtgatactggaagttcagtcaaatcccaaaatacagaaagctgca
gtacataaaatttccaaaaaagtagatatggatgtgtataggaagagaatggagatcatg
cttcaggatatgtttggagaagactgtgtgagttcaaaagatggctctgtcctatgcatc
acagtagatggaaagactgcaaacatttcactggacactcggacagttgactgtgagcca
ggaagcgaagatgatgaatcccttcgtgaaatggtggagttggctgcacagaggctttat
gatgccctcagcccagtgtactga
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