Strix uralensis (Ural owl): 141941360
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Entry
141941360 CDS
T11361
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
sura Strix uralensis (Ural owl)
Pathway
sura03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sura00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
141941360 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sura03400
]
141941360 (MSH6)
DNA repair and recombination proteins [BR:
sura03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
141941360 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
MUM1-like_PWWP
nSTAND_NTPase5
Motif
Other DBs
NCBI-GeneID:
141941360
NCBI-ProteinID:
XP_074720039
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Position
3:111750284..111765323
Genome browser
AA seq
1374 aa
AA seq
DB search
MSRQSTLLRFFPKASPASPRAAAPAPATPQAGAGIRRRAPGEQNGREAAASPAGAASNGA
AGRAAARRQEAGDKGGGDRGGGDKKGGGDGAAAKAPSVPCEYSPGDLVWAKMEGYPWWPC
LIYNHPTEGTIVRGKGKSTRVHVQFFDDSPTRGWVSIKYLRPYKGSSDGETLKGGMFYST
KPEIKRAMVLADDAMSKDKTKRLELAVCSEPSDTEEEEEEEMEQMSESASGNSDDCNSEE
DVKSNKRVMSRESAIKAKRRRVLDSDSDHDGSDVEFKPDVKEAASSEEASSGVDENESTD
TETDTESVAESPIKVPSKRKRREINKPAKRSSLENECSETPKRAATVSLEAKSKLTSFAA
PESFESQANACSGGISGFAAWEHEKLDWLQEGKKKDAHRKRQGDPDYDPCTLYVPEDYLN
KCTPGMRRWWQLKSQNFDAVIFYKVGKFYELYHMDAVTGVNELGLIFMKGTWAHSGFPET
AFGRFSDVLVQKGYKVARVEQTETPEMMETRCKSMAHPTKFDRVVRREICRIITKGTQTY
SVLDCDPSENHNKYLLCVKEKEDSAGQRVYGVCFVDTSVGKFYVGQFSDDRHCSRFRTLV
AHYMPVQVLYEKGNLSVDTQKILKGSLVSCIQEGLISGSQFWNASKTLKVLLEEGYFKEK
QNSENGCSLPSVINSLTSESDSLGLTPGENSELALSALGGCVFYLKKCLIDQELLSLANF
EEYVPVDIDTAKTTSSSSFFAKTGQRMVLDGVTLMNLEVLQNGTNRTTEGTLLERIDSCC
TPFGKRLLKQWLCAPLCNPKSINDRLDAVEDLLAVPDKMSEVSEHLKKLPDLERLLSKIH
SIGSPLKSQNHPDSRAIFYEEVKYSKKKIADFLSALEGFKVMNEIVDVMEEVASDFKSKV
LKQLVTRKAKNPDGRFPDLSAELKRWDTAFDHNQARKTGVITPKAGFDPDYDKALQDIKA
VEEDLHKYLDKQRKLLGFKSVLYWGAGKNRYQMEIPESAISRNLPEEYELKSSRKGYKRY
WTKEIEKMLAAMVNAEERRDAALKDCMRRLFYNFDKNSKDWQTAVECIAVLDVLMSLANY
SQDGDGPLCRPVILLPVDSAPPFLELKNSRHPCITKTFFGDDFIPNDIVIGSKDEDSSSE
ASCVLVTGPNMGGKSTLMRQAGLLVIMAQLGCYVPAEVCRLTPIDRVFTRLGASDRIMSG
ESTFFVELSETSSILQHATEHSLVLVDELGRGTATFDGTAIASAVVRELAEKIKCRTLFS
THYHSLVEDYSHTAAVRLGHMACMVENESEDPSQETITFLYKFIEGACPKSYGFNAARLA
NIPEEVIQKGHRKAKEFEKMTISLRIFRYLCLVVDGATREANAVQKLTAMINHL
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgccagagcaccctgctccgcttcttccccaaggcctccccggcatcgccccgg
gcggccgcaccggcacccgctacaccgcaagccggcgcggggatccgccgccgcgctccg
ggggagcagaatggccgcgaggccgccgccagccccgccggcgcggccagcaacggcgca
gcgggcagagctgcggcccggcgccaggaggcgggggacaagggcggaggggacaggggc
ggaggggacaagaagggcggaggggacggcgcggccgccaaggcccccagtgtcccctgt
gagtattctcctggtgacttggtctgggccaagatggaaggttatccttggtggccgtgt
ctcatatacaaccatccgactgagggaacaatagtcagaggaaaaggaaaatccactcgt
gtccatgtacagttttttgatgacagccctacaaggggttgggtcagtattaaatatctg
aggccgtataaaggttcatcagatggggagacgctgaagggaggtatgttttacagtaca
aagcctgaaattaaaagagccatggtgctagcagatgatgcaatgagtaaagataaaact
aagcggcttgaactggcagtatgcagtgaaccttcagacacagaggaggaggaagaggag
gaaatggagcagatgagtgaaagtgcctcaggcaacagtgatgactgcaatagtgaggag
gatgtgaagagtaacaagcgagtaatgagcagggaaagtgccataaaagccaagagaaga
agagtgttggattctgacagtgatcatgatggctctgacgtagagttcaagcctgatgtg
aaagaagcagcaagcagtgaggaagctagtagtggggtggatgaaaatgaatctactgac
acagagacagacacagagagtgttgcagaaagtcccataaaagtcccttctaaacgaaag
agaagagagataaacaagcctgctaaaaggagtagcttagaaaatgaatgttctgaaacg
cccaaaagagcagcaacggtttctttagaagccaagtctaagctgacatcatttgcagca
cctgaaagttttgaatctcaagcaaatgcttgcagtggaggcatcagcggcttcgcagca
tgggaacatgaaaagcttgattggctgcaggaagggaaaaagaaagatgcgcacaggaaa
cggcagggtgaccctgattatgacccgtgtactctgtatgtacccgaggactatctcaac
aagtgtacaccaggaatgcggaggtggtggcagctgaaaagtcaaaactttgatgctgtg
attttctacaaagttggaaaattctatgagttgtatcacatggatgcagtcactggcgta
aatgagctgggcctgatctttatgaaaggtacttgggcccattcaggttttccagaaact
gcatttggcagattctctgatgttctagtgcagaagggctacaaggtagcgcgtgttgag
caaacggaaactcccgaaatgatggaaacgcgctgcaagtcaatggctcacccaacaaaa
tttgacagggtcgtgcggcgagaaatatgcagaatcatcaccaaaggaactcagacttac
agcgttctggactgtgatccctccgagaaccataacaaataccttctgtgcgttaaggaa
aaagaagactctgctggacaacgtgtttatggggtctgctttgttgacacgtcagtgggg
aagttttacgtcggccagttctcagacgaccggcactgttcgaggtttaggactttagta
gcacattacatgcctgtgcaggtactgtatgagaaggggaacctctctgtggacacacag
aagatactaaagggctcgcttgtttcttgcattcaggaagggctgatctctggttcccag
ttctggaatgcatctaaaacactaaaagtccttcttgaagaaggatatttcaaggagaaa
cagaactctgaaaatggatgttctctgccctctgtaatcaactctctgacgtcggagagc
gactcgctgggattaactcctggtgaaaacagtgaattagctttgtcagctcttggggga
tgtgtcttctatctcaaaaaatgtctgattgatcaggagctgttatcgctggcaaacttc
gaggagtatgtccctgtggatattgatactgcaaagactacgagttcaagtagtttcttt
gccaaaactggccagcggatggtgctggatggagtcaccctgatgaacttggaagtcctg
cagaatggaaccaatagaaccacagaaggcactttgttggaaaggattgattcttgttgt
acgccatttgggaagcgactcctgaaacagtggctctgtgctccgctttgtaatcctaaa
tccatcaacgatcgtttagatgctgttgaagatcttctggcagtgccagataaaatgtct
gaagttagtgagcacctgaagaaacttcctgaccttgaaaggttgctcagcaaaattcac
agtattgggtcgccacttaaaagtcagaaccatcctgacagcagggccatcttttatgaa
gaagttaaatacagcaaaaaaaaaattgctgactttttgtctgcactggaggggtttaaa
gtaatgaatgaaattgttgatgtcatggaagaagttgccagtgacttcaaatctaaagtc
cttaagcagctagtgacccgcaaagccaaaaatcccgatggccgcttcccagacttgagt
gcagagcttaaaagatgggatactgcttttgatcataaccaggctcgaaagacaggagtg
attactccaaaggcgggttttgaccccgattatgataaagcactacaggatattaaagct
gttgaggaagatcttcacaagtacctggataagcagcgcaaactgcttggattcaaatcc
gtgctgtactggggggcaggcaaaaaccgataccaaatggaaataccggaaagtgcaata
tcacgtaatttgcctgaggaatacgagttgaagtcatccaggaagggatataaacgttac
tggaccaaggagattgagaagatgctggctgcaatggttaatgctgaagagcgcagagat
gcagcactaaaagactgtatgaggcgtttgttttacaacttcgacaaaaatagcaaagac
tggcagacagctgtggagtgcattgctgtgttagatgtcttgatgtcccttgctaactac
agtcaagatggtgatggaccactgtgccgacctgtaattctactgcctgtggatagtgct
cctcccttcctggaacttaaaaattcacgccatccatgcattacaaaaactttctttggg
gatgattttattcctaatgacatcgtgataggcagcaaagatgaagatagcagtagtgaa
gcttcctgtgtgttagtaactggcccgaatatgggtggcaaatctacgctcatgagacag
gctggtctcctggttataatggctcaactgggatgctacgtacctgctgaagtctgcagg
cttacaccgattgacagagtatttacgaggcttggtgcctcagacagaattatgtcaggt
gaaagtaccttctttgttgaattgagtgagacttccagcattctccagcatgcaacagag
cattcccttgttcttgtggatgaactgggcagaggcacagctacttttgatggaacagct
atagcgagtgcagttgtgagagaactcgcagagaaaatcaagtgtcggactctgttctcc
acacactaccattcgctggtggaggattactcgcacaccgcggctgtgcggcttggccac
atggcatgtatggttgaaaatgagagtgaagatccaagccaggaaaccattacattcctg
tataagttcattgaaggcgcgtgtccaaagagctacggcttcaatgcagcaagacttgct
aatattccagaggaagttattcagaaggggcacagaaaagcaaaagagtttgaaaaaatg
accatttcactgagaatatttaggtacctgtgcctggtggtggatggtgcaacgagggag
gcaaacgctgtgcagaaacttaccgctatgatcaatcacctttaa
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