Strix uralensis (Ural owl): 141941401
Help
Entry
141941401 CDS
T11361
Symbol
XRN2
Name
(RefSeq) 5'-3' exoribonuclease 2 isoform X1
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
sura Strix uralensis (Ural owl)
Pathway
sura03008
Ribosome biogenesis in eukaryotes
sura03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sura00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
141941401 (XRN2)
09123 Folding, sorting and degradation
03018 RNA degradation
141941401 (XRN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sura03021
]
141941401 (XRN2)
03019 Messenger RNA biogenesis [BR:
sura03019
]
141941401 (XRN2)
03009 Ribosome biogenesis [BR:
sura03009
]
141941401 (XRN2)
03016 Transfer RNA biogenesis [BR:
sura03016
]
141941401 (XRN2)
Transcription machinery [BR:
sura03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
141941401 (XRN2)
Messenger RNA biogenesis [BR:
sura03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
141941401 (XRN2)
Ribosome biogenesis [BR:
sura03009
]
Eukaryotic type
Pre-60S particles
RNases
141941401 (XRN2)
Transfer RNA biogenesis [BR:
sura03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
141941401 (XRN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRN_M
XRN_N
Motif
Other DBs
NCBI-GeneID:
141941401
NCBI-ProteinID:
XP_074720171
LinkDB
All DBs
Position
3:complement(116646161..116697042)
Genome browser
AA seq
949 aa
AA seq
DB search
MGVPAFFRWLSRKYPSIIVNCVEEKAKECNGVKAPIDTSKPNPNEVEFDNLYLDMNGIIH
PCTHPEDKPAPKNEDEMMVAIFEYIDRIFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR
ASKEGMEAAEEKQKIRQEILAKGGILPPEEVKERFDSNCITPGTEFMDNLAKCLRYYIAD
RLNSDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG
LATHEPNFTIIREEFKPNKPKPCALCNQMGHEVKDCQGLPREKQGKHDQFADSLPIAEQE
FIFIRLCVLREYLERELTMASLPFTFDFERSVDDWVFMCFFVGNDFLPHLPSLEIREGAI
DRLVNIYKNVVHKTGGYLTESGFVNLQRVQMIMLAVGEVEDSIFKKRKDDDDNFKRRQKE
KRKRMKRDQPSFIPGGQFSPQALGNRSSPQAISNPRQAAFEMRMHDRQNSTTSSPNTSLT
SDGSPSLTGGIKRKAEDSDSEPEPEDNIRLWETGWKQRYYKNKFDVDASDEKFRRKVVQS
YVEGLCWVLRYYYQGCASWNWYYPFHYAPFASDFEGIADMPSDFEKGSKPFKPLEQLMGV
FPAASGNFLPPTWRKLMTDPESSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAA
LEEVYPDLTPEENRRNSLGGDVLFVGKHHPLCDFVVEQYKTKNTEPVDIPPELCHGIQGK
LTLNENAVLPDQVVESPVPMLRDLAQNSAVSISFKDPQFDEDFVFKATVLPGAKKPAPVL
KPGDWEKTNNDGRPWRPQLSFNRDRKPVHLDQSAFRTLGHTMPRERGMPGMYANAVPLGT
YGSPYARPLLSGQQQIPKLLSNLRPQESWRGPTPLFQQTPQRTAGAAPLLAWNRMLQSQN
QYQPSQYQGLGGPMSYPQRPEDRMDRGRQAYGPGRPYPLPPPSGRYSWN
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgggagtcccggctttctttcgctggctcagccgcaaatacccctccatcatcgttaac
tgcgtggaggagaaggctaaagagtgcaatggcgtcaaggctccaattgatacaagcaaa
cctaaccctaatgaggtggagtttgataacctatatttggatatgaatggtataattcac
ccttgtacacatccagaagacaagccagcgcccaaaaatgaagatgaaatgatggttgcg
atttttgagtatattgacaggatcttcaatattgtaagaccaaggcgacttctttacatg
gctatagatggagtagctccacgcgcaaaaatgaatcaacagcggtcaagaagattcaga
gcatcaaaggagggcatggaagctgctgaagagaagcaaaaaataagacaagaaattctg
gcaaaaggtggcattcttcctccagaagaagtgaaagagagattcgacagcaactgtatt
accccaggaactgagtttatggacaatcttgctaaatgcctccgctattacattgctgac
cgtttgaacagtgacccagggtggaaaaatttgacagttattttgtctgatgctagtgct
cctggtgaaggtgaacataagatcatggattacattagaagacaaagagctcaaccaaac
catgacccaaacactcatcattgtctgtgtggggctgatgctgatctgattatgcttggg
ttagctacacatgaaccaaacttcactataattagggaagagtttaaaccaaataaacct
aagccatgtgctctttgtaaccagatgggtcatgaagttaaagattgccaaggtctgccc
agagaaaaacaagggaagcacgatcagtttgcagacagtcttcctattgctgaacaagaa
tttatcttcatccgattatgtgttttgcgagagtatttggaaagagaactcactatggcc
agtttgcctttcacttttgattttgaaagaagtgttgatgactgggtctttatgtgcttc
tttgtgggaaatgactttcttcctcatctgccatctttggagatcagggagggagcaatt
gatcgattggttaacatatataaaaatgtggtgcacaaaactgggggctacctcacagaa
agtggttttgtcaacctacagagggtccagatgattatgttagctgttggagaagttgaa
gatagtattttcaaaaagagaaaagacgatgatgataactttaaaaggagacaaaaagaa
aaaagaaaaagaatgaagagggatcagccttcttttattcctggtggacagttttcccct
caagctctgggaaatcgatctagtcctcaagcaatcagtaaccctagacaagctgccttt
gagatgagaatgcatgacagacagaattctacaacttcatctccaaataccagcctcact
tctgatggcagcccatccctgacaggaggaattaagcgaaaagctgaagatagtgacagt
gaacctgagccagaggataatatcaggttatgggaaaccggttggaaacagcgctactat
aaaaacaaatttgatgttgatgcttctgatgagaaattccgtcgtaaagttgtacagtcc
tatgtggaagggctttgctgggttctcagatattattatcagggctgtgcatcctggaac
tggtattacccttttcactatgctccatttgcttctgactttgaaggtattgcagacatg
ccttcagattttgagaaaggctcaaaaccgtttaagcctcttgaacaacttatgggagta
tttccagctgcaagtggaaattttctgccaccaacgtggaggaagctcatgacagatcca
gaatcaagcataattgacttctaccctgaagattttgctattgatttaaatgggaagaaa
tacgcttggcaaggtgttgcgttattgccatttgttgatgagcgacgccttagagctgcc
ctggaagaagtctacccggacctcactcctgaagaaaacagaagaaatagccttggtggt
gatgttctctttgttggaaaacaccatccactttgtgactttgttgtagaacagtacaag
accaaaaatacagagccagtggatatacccccagagctgtgccatggaatccagggaaag
cttacactgaatgaaaatgctgttcttccagatcaggtagtggagtctcctgttccaatg
ctgcgtgatcttgcacaaaattctgcagtcagtatctctttcaaagatccacaatttgat
gaagactttgttttcaaggctacagtgttacctggtgcaaagaaacctgctccggttctg
aagccaggagactgggaaaaaaccaacaatgatggcaggccttggagaccacagctgtct
tttaaccgagacagaaaaccagtccatttggaccagtcagcttttagaactttaggccat
acgatgccaagggaaagagggatgccaggaatgtatgccaatgcagtacctcttggaacg
tacgggagcccatacgccaggccacttctgagtgggcagcagcagattcctaaattgttg
tcaaatcttagaccccaggagtcttggcgaggtcctacgcccttgtttcaacagacacca
cagagaactgctggggctgctcctcttcttgcctggaaccgcatgctgcaatcccaaaat
cagtaccagccaagtcagtaccaagggctgggtggaccaatgagttacccacagagacct
gaagatcggatggacaggggaagacaggcatatggccctgggaggccctacccgctacca
cctccctcaggaagatacagctggaattag
DBGET
integrated database retrieval system
