Strix uralensis (Ural owl): 141942443
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Entry
141942443 CDS
T11361
Symbol
HTT
Name
(RefSeq) huntingtin isoform X1
KO
K04533
huntingtin
Organism
sura Strix uralensis (Ural owl)
Brite
KEGG Orthology (KO) [BR:
sura00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sura03019
]
141942443 (HTT)
04131 Membrane trafficking [BR:
sura04131
]
141942443 (HTT)
03029 Mitochondrial biogenesis [BR:
sura03029
]
141942443 (HTT)
Messenger RNA biogenesis [BR:
sura03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
141942443 (HTT)
Membrane trafficking [BR:
sura04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
141942443 (HTT)
Mitochondrial biogenesis [BR:
sura03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
141942443 (HTT)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_GCN1
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
141942443
NCBI-ProteinID:
XP_074721754
LinkDB
All DBs
Position
4:10846712..10935024
Genome browser
AA seq
3096 aa
AA seq
DB search
MATMEKLMKAFESLRSFQQQQGPAAIPEEPLQRPKKELSTTKKDRVNHCLTICENIVAQS
LRNSPEFQKLLGIAMELFLLCSEDAESDVRMVADECLNKVIKALMDSNLPRLQLELYKEI
KKNGASRSLRAALWRFAELAHLVRPQKCRPYLVNLLPCLTRISKRPEESVQETLAAAIPK
IMAAFGNFANDNEIKVLLKAFIANLKSSSPTIRRTAAGSAVSICQHSRRMQYFYAWLLNV
LLGLLVPVEDDHPTLLILGVLLTLRYLIPLLQQQVKDTSLKGSFGVTRKETEISPSPEQL
IQVYELTLHYTQHQDHNVVTGALELLQQLFRTPPPELLHALTASGGIAQVSVSKDEPASR
NRSGSIVELIAGGGSSCSPVLARKHKGKILLGEEEGLEDDSETRSDVSTASFAASMKGEI
TSELASSSGVSTTGSVGSSAADPTGHDIITEQPRSQHTLQSDSVDLTSCDLTSTATEGEE
DDVLSRSSSQISAVQSDPTMDLNDGTQASSPISDSSQTTTEGPDSAVTPSDSSEIVLEGA
EGQYSGMQIGQLQDEEDEAANILQDDSSESFRNSSVALQQPHLLKTMSHSRQPSDSSVDR
FTSKEDAADPGDHENKPSRVKGDIGHYTDGNSAPLVHCVRLLSASFLLTGEKGALVPDRD
VRVSVKALAVSCVGAAVALHPEAFFSKLYKTPLEAMGEEYEEQYVSDILNYIDHGDPQIR
GATAILCGTVVNSILIKSRFDVEKWLINVRSSTGNLFSLVDCIPLLQKTLKDESSVTCKL
ACTAVRHCIMSLCSSSYSELGLQLIVDLLTLKNSSYWLVRTELLETLAEVDFRLVSFLEG
KTESLHRGIHHYTGLLKLQERVLDNVVICLLGDEDPRVRHVAAASLMRLVPKLFYNCDQG
QADPVVAVARDQSSVYLKLLMHETQPPSHFAVSTITRTYRGYNMLQSPTDVTMENNLSRV
IAAISHALTISTTRALTFGCCEALCLLSTTFPVCTWSMGWHCGVSQPSPSDEAQKGCTIG
MAGMVLSLLSSAWFPLDLSAHQDALILTGNLLAASAPKCLKNPWSAEEDSNQGAAKQEEP
WPALADRTLVTLVEQLFSHLLKVINICAHVMDDVAPGPAVKAALPSLTNPPSLSPIRRKG
KERESVEQSSVPMSPKKGGETSPATRQTDAPGPVPTSKSSSVGSFYHLPSYLKLYDVLKA
THANYKVTLDLQNSNEKFGCFLRSALDVLSQILELATLQDIGKCVEEILGYLKSCFNREP
TMATVCVQQLLKTLFGTNLASQYDGLSSNPNKAQGKAQRLGSSNLRPGLYHYCFMAPYTH
FTQALADASLRNMVQAEQEHDASGWFDVLQKVSTQLKTSITSAAKHRADKNAIHNHIRLF
EPLVIKALKQYTTTTSVQLQRQVLDLLAQLVQLRVNYCLLDSDQVFIGFVLKQFEYIEVG
QFRESEAIIPNIFFFLVLLSYERYHSKQIIGIPKIIQLCDGIMASGRKAVTHAIPALQPI
VHDLFVLRGTNKADAGKELETQKEVVVSMLLRLIQYHQVLEMFILVLQQCHKENEDKWKR
LSRQIADIILPMLAKQQMHIDSHDALGVLNTLFEILAPSSLRPVDMLLRSMFVTPKTMAS
VSTVQLWISGILAILRVLISQSTEDIVLSRIQELSFSPYLISCQSINRLRHGENNISTPE
DHTELKQAKYLPEETFSRFLLQLVGILLEDIVTKQLKVDMNEQQHTFYCQELGTLLMCLI
HIFKSGMFRRITAAATRLFTGDGSDGSFYTLESLSDLVQSMIPTHPSLVLLWCQILLLVN
YTNYNWWSEVHQTPKRHSLSTTKLLSPQISGDSDESDSESKRGMCNREIVRRGALILFCD
YVCQNLHDSEHLTWLIVNHVQDLINLSHEPPVQDFISAVHRNSAASGLFIQAIQSRCENL
AAPTTLKKTLQCLEGIHLSQSGAVLTLYVDKLLCTPFRVLARMVDTLACRRVEMLLAATL
QNSITQLPVEELDRIQEYLQNSGLATRHQRLYSLLDRFRLMVAPDTTSPSPLVTSHPLDG
EDQPALENVILDKDWYVSLVRSQCCMKSDSALLEGAELVNRIPQPDLNSFMTSKEFNLSL
LAPCLSLGMNEISRDQKSSFFETARRVTLDHVSATVQNLPANHQVFQPLLPTEPSTYWKK
LSDIFGDEVMYQSTMTLCRALAQYLLLLSKLPAGLRVPPDKEDDILKFVVTSVEALSWHL
MHDQIPLSVDLQAALDCCCLTLQQPSLWNLLASAANVTYACSLINCIRFIIEAVAVEPGN
QLLSPERKKNTSKGLSEGEVDSNTQKTKHITAACEMVAEMVECLQTVLALGHKRNSSIPA
FLTPVLKNIIISLARLPLVNSYTRVPPLVWKLGWSPKPAGDFGTVFPEIPVEFLQEKEIF
KEFIYRINTLGWISRTQFEETWATLLGVLVTQPIVMDQEENQQEEDTERTQINVLAVQAI
TSLVLSAMTIPVAGNPAVSCLEQQPRNKALKALDTRFGRKLSVIRGIVEQEIQAMVSKRD
NIATHHLYQAWDPVPSLSPATTGALISHEKLLLQINTEREIGDMDYKLGQVSIHSIWLGN
NITPLREEEWGEDEEDENDIPAPSSPPTSPINTRKHRAGVDIHSCSQFLLELYSQWILPS
NPSKRTPVILISEVVRSLLAVSDLFTERNQFEMMYTTLTELRKVHPSEDEILVQYLIPAT
CKAAAVLGMDKAVAEPVSRLLESTLRSTHMPSRIGALHGILYILECDLLDETAKQLIPII
SEYLLSNLRGVAHCVNIHNQQHILVMCAAAFYLIENYPLDVGPEFSAGIIQMCGVMVSGS
DESTPSIIYHCVLRGLERLLLSEQLSRLDSESLVKLSVDRVNVQSPHRAMAALGLMLTCM
YTGKEKISPSRTTDANPAAPDSESVIVAMERVSVLFDRIRKGFPFEARVVARILPQFLDD
FFPPQDVMNKVIGEFLSNQQPYPQFMATVVYKVFQTLHSTGQSSMVRDWVMLSLSNFTQR
TPVAMAMWSLSCFFVSASTSQWISAILPHIISRMGKSEQVDVNIFCLVAIDFYRHQIDEE
LDRRAFQSVFEVVASPGTPYHRLLTCLQNVHKVTAC
NT seq
9291 nt
NT seq
+upstream
nt +downstream
nt
atggccaccatggagaagctgatgaaggccttcgagtcgttgcgctccttccagcagcag
cagggtccggctgccatccccgaggagccgctccagagaccaaagaaagaactttcaact
accaagaaagatcgagtgaatcattgcctaacaatatgtgaaaatatagttgctcagtct
ttaagaaattctccagaatttcagaaactgctgggaattgctatggaactctttctcctc
tgcagtgaggatgcagaatctgatgtccggatggttgctgatgaatgccttaataaagtt
attaaagctttgatggattccaatcttcctaggttacaattagaactgtataaagagatt
aaaaagaatggtgcttccagaagtctacgtgctgcactctggagatttgctgagcttgcc
catctagttcggcctcaaaagtgcaggccgtacttagtgaaccttttgccctgtctaaca
cgaataagtaagagacctgaagaatcagttcaagagacactagctgcggcaataccaaaa
atcatggcagcgtttggcaattttgcaaacgacaatgagattaaggttttattgaaggct
ttcatagctaatcttaaatccagttcccctactatccgtcgaacggcggcaggatcagca
gtaagcatctgtcaacattcacgaagaatgcagtatttttatgcctggttattgaatgta
cttttaggcttgttggttcctgtggaagatgatcatcccactcttttaattctgggtgtt
ttacttacactaaggtatctcatacctttattgcaacagcaagtaaaggataccagcctg
aaaggcagttttggcgtaacaagaaaagaaacagaaatttcaccttcaccagaacaactt
atacaggtttatgaattgactctgcattacacccagcatcaggaccataatgttgtgact
ggagctttagaattattacaacagctctttagaacgccaccacctgaacttctccatgcc
ctgaccgcctcagggggcatcgcacaggtcagtgtatccaaagatgaacctgccagcagg
aaccgcagtgggagcatagtggaacttatagctggaggggggtcttcatgcagccctgtt
cttgcaagaaagcataaaggtaaaatacttcttggtgaagaagaaggtttggaggacgat
tctgaaacccgatcagatgtcagcactgcatcgtttgcagcttctatgaagggtgagata
accagtgaactagcttcttcatcaggtgtgtcgacaactgggtcagtagggagttcagct
gctgatcctactggacatgatatcattactgagcagccacgttctcaacatacgttgcag
tcagactctgtagacctaacaagctgtgatttgacaagtacagctactgaaggggaagaa
gatgatgtgcttagtcgaagctccagccagatcagtgctgtccagtcagatcccactatg
gacttgaatgatggtacacaggcttcctcgccaattagtgacagctctcagactactacg
gaaggtccggactctgctgtaaccccttcagacagttctgaaattgttttggagggtgcc
gaaggacaatattctggaatgcaaattgggcagctacaggatgaggaagatgaggctgca
aatattctccaagatgattcatcggagtctttcagaaattcttctgttgctcttcaacaa
cctcacctgttgaaaaccatgagccatagtaggcagccttctgatagcagtgtagacaga
tttacatcaaaagaagatgcagcagatcctggtgatcacgaaaataagccctccagggta
aagggagacataggtcactataccgatggaaattctgctcctttagtgcactgcgttaga
cttctgtcagcctcttttctactcactggggagaaaggagctttagttcctgatagagat
gtgagagtcagtgtaaaagccctggcagtaagttgtgttggagcagccgttgcacttcac
cctgaggctttcttcagcaaactgtataaaacaccccttgaagcaatgggagaagagtat
gaggagcagtatgtatcggatattctgaactacattgaccatggagatccccagattaga
ggagctactgccattctgtgtggaacagttgtcaactccattctaataaaatcccgcttt
gatgtggaaaaatggctaataaatgtcagaagctcaacaggaaatctcttttccttggta
gactgcatacctctgttacagaaaaccctgaaagatgagtcctctgttacatgcaaactg
gcttgtacagctgtgaggcattgcatcatgagcttatgtagtagcagttacagtgaacta
gggctacaattaattgtcgatctccttacactgaagaatagctcatattggctagtaagg
acggaacttctggagacacttgcagaggtagattttcggctagtcagcttcttggaagga
aaaactgagagcttgcacagaggtattcatcattatactggtctgctaaaacttcaggag
agagtacttgataatgttgtaatatgtctgcttggagatgaagatccaagagtgagacat
gtagctgcagcttcattaatgaggcttgttccgaagctgttttataactgtgatcaagga
caggctgatccagttgtggcagtagcaagagaccaaagcagcgtctacctgaaactgcta
atgcatgaaacacagcctccatctcactttgcggtgagcactatcaccagaacatacaga
ggttacaatatgctgcaaagtccaacagatgtcactatggaaaacaacctctcaagggtt
attgcagcaatctcccatgcattgacaatatccactacaagagcacttacgtttggctgc
tgtgaagctttgtgtcttctctccacaacatttccagtctgcacctggagcatgggatgg
cactgtggtgtttcccagccaagtccttcagatgaagctcagaagggctgcaccattgga
atggctggcatggtcctgtctctcctttcatcagcatggttccccctggacctctctgca
catcaggatgctttgattttgactggaaacttgcttgcagcaagtgctcccaagtgctta
aagaatccctggagtgctgaagaagattcaaatcaaggtgctgcaaagcaggaggaaccc
tggccggctctggcagatcgaactcttgttactttagtagaacagctcttttctcatctg
ctgaaggtcattaatatttgtgcacatgtaatggacgatgttgctcctggcccagcagta
aaggcagcattaccttctctcacaaacccaccttctcttagtccaattcgaaggaagggg
aaagagagggagtctgttgaacagtcatctgtgccaatgagccctaaaaagggtggtgaa
acgagtccagctactaggcaaactgatgctcctgggcctgttccaacaagtaaatcttct
tcagtaggaagcttttatcatcttccatcatatctgaagttatacgatgtcttgaaggca
acccatgctaattataaggttactttggatctccagaacagtaatgaaaagtttggatgt
ttcttacggtctgccttagatgttctgtctcaaatcttggaacttgctactcttcaagac
attggaaagtgcgtagaagaaattttgggatacctaaaatcatgtttcaacagagaacca
acaatggcaacagtttgtgtacagcagttactgaaaacattgtttgggacaaatctggct
tctcagtatgatggtttgtcttcaaacccgaacaaagctcaaggcaaagctcaacgccta
ggttcttccaatttgagacctggtctctatcattattgcttcatggcaccatacacacat
tttacacaggcccttgctgatgccagtctaaggaacatggttcaggctgagcaggaacac
gatgcttcgggatggtttgatgtgttgcaaaaagtttctacacagctgaaaactagcatt
accagtgcagcaaaacaccgtgctgataagaatgctattcacaatcacattcgtttattt
gaaccccttgtcataaaagcattgaaacaatatactacaacaacatcagtacagctgcag
agacaagttctagacttgcttgctcaactggttcagctacgagttaactactgtcttctg
gattcagatcaggtgtttattggatttgtgctaaagcagtttgaatacattgaagtagga
cagttcagggagtctgaagcaattattcctaatatattttttttcctggtgttgctgtct
tatgagaggtatcattccaaacagataattggaattcctaagatcattcagctgtgtgat
ggtatcatggccagtggaaggaaagctgttacacatgcaataccagctctgcaacccatt
gttcatgatctctttgtgttaagaggaacaaataaagctgatgctggaaaagagttggag
acacaaaaggaggtggtagtgtcaatgctactgagacttattcagtaccatcaggtgcta
gaaatgttcatcctagtattgcaacagtgtcataaggaaaatgaagacaaatggaaaaga
ttgtcccggcaaatagctgacattattctcccaatgcttgcaaaacaacagatgcatata
gactctcatgatgctctgggagtattgaacactttgtttgaaattttggctccttcatcc
ctccgccctgtggacatgcttttaaggagtatgtttgttactcctaaaacaatggcatca
gtgagcaccgtccagctatggatttctggaattttagctatccttagagttctgatctcg
cagtcaacagaagacatcgttctatcccgtatacaagagctttccttctcaccatatttg
atttcatgtcaatcaattaacagactgagacatggagaaaataacatatccacaccagag
gatcatactgagcttaaacaggctaagtatctgcctgaagagacattttctaggttttta
ttacaactggttggcattctattggaagatattgtcacaaaacagttgaaagtggacatg
aatgagcagcaacatactttctactgccaggagctgggcacactgcttatgtgcttaata
catatcttcaaatcagggatgtttagaagaatcacagctgcagccaccagactttttaca
ggagatggatctgatggtagtttctatactcttgaaagtttgagtgaccttgttcagtcc
atgattcccacacatccttctttagttctcctctggtgtcaaatcctgcttcttgtcaat
tataccaactacaactggtggtcagaagtgcatcaaaccccgaagagacacagtctttct
actactaaattgcttagccctcagatatctggagacagtgatgaatcggattcagaatct
aaacgtggcatgtgcaatcgagagatagtgagaagaggagcactcattcttttttgtgac
tatgtttgtcaaaatctacatgattcagaacacttgacctggcttattgtaaatcatgtt
caagacttgattaatctgtcccatgagcctccagtacaagactttattagtgctgttcac
aggaattcagcagccagtggtctcttcatccaggccattcaatcacggtgtgagaatctt
gcagctcccacaactctgaagaagactttacagtgcttagaaggaatacatctcagccag
tctggggctgttttaacattgtatgttgataagcttttgtgtactccattccgtgtgctt
gctcgcatggttgacacactggcttgtcgtcgggtagaaatgcttttggctgcaacttta
cagaacagcattactcagttaccagttgaagaactggatagaattcaggaataccttcaa
aacagtggattagcaacaagacaccaaagactttactcactcttggataggtttcgtctt
atggtagcaccagacacaactagtccttcacctctggttacctcacatccactagatgga
gaagaccaaccagctttagagaatgtaattctagacaaagactggtatgtgtcactagtg
aggtcacagtgttgcatgaagtctgactcagcactgctagaaggtgcagagctggtaaat
aggattcctcagcctgacctgaactccttcatgaccagcaaggaattcaacctgagcttg
ttagcaccttgtttaagccttggcatgaatgaaatctcgagagaccagaagagtagcttc
ttcgaaacagctcgtagggtaactctggatcatgtgtctgccactgtacaaaaccttcct
gccaaccaccaggtttttcaaccactattgccaactgaaccatcaacctactggaaaaaa
ctaagcgatatctttggagacgaggtgatgtatcagtctacgatgacactttgtcgtgca
ctggctcagtatttgttgttactctcaaaactaccagctggtctccgtgttcctcctgac
aaagaggatgatatcctgaaatttgtagttacgtcagtagaggcactatcatggcattta
atgcatgaccagattccattaagtgtagatcttcaagctgctctggattgttgctgtctg
acattacagcagcctagtctctggaatttgctggcttctgcagctaatgtgacatatgct
tgctccttaattaattgcattagatttatcatagaagcagttgctgttgaacctggtaat
caactccttagccctgaaagaaagaagaatacttcaaaaggcttaagtgagggtgaagtt
gattcaaacacacagaaaactaaacacattactgcagcttgtgaaatggtagctgagatg
gtggaatgcttacagactgtcttggcactggggcacaaaagaaacagcagtatcccagca
tttcttactcctgtcctcaagaacatcatcatcagtttagcaaggctgcctctagtgaac
agttacacaagagtacctcctttggtctggaaattaggctggtcaccaaaacctgcaggt
gatttcggcacagtttttcctgaaatcccagtagaatttcttcaagaaaaagaaatcttt
aaggagttcatctatcgcattaatacacttggatggatcagccgtactcagtttgaagag
acttgggctactttgcttggtgtgctagtaactcagcctattgtaatggaccaagaggag
aaccaacaagaggaagatacagagaggacccaaattaatgttcttgcggtacaagccata
acttccttggtgctgagtgcaatgacaatacctgttgcagggaatccagcagttagctgt
ttggaacagcagccccgcaacaaagctttaaaagctctggacacaaggtttggaaggaag
ctaagtgttatcaggggaattgttgaacaggaaatccaagcaatggtatctaagagagat
aatattgctactcatcacttataccaagcctgggaccctgttccatcgctttctcctgct
actacaggtgctcttatcagccatgaaaaactcttactgcagatcaatactgaacgagaa
ataggagatatggattataaactgggacaggtctcaatacactccatatggttaggaaat
aatatcactccattgagagaagaagagtggggtgaggatgaagaagatgagaatgacata
cctgctccttcctcaccaccaacctctcctattaacaccaggaaacaccgggctggtgtg
gatatacattcttgttctcagttcttgcttgaactgtatagtcagtggatattgccatca
aaccctagcaagagaacgccagtcattttgattagcgaagtggtgcgatcacttctggca
gtatcagacttatttacagaaaggaatcagtttgagatgatgtatacaacattgacagaa
ttgcgaaaggtacatccatcagaagatgagattcttgtacagtatttgataccagccact
tgtaaagctgctgctgttctcggaatggataaagctgtggctgaaccagtaagtcgactg
ctggaatcaaccctaagaagcacccatatgccaagtcggattggagctctacatggaatt
ctttatatccttgagtgtgacttgcttgatgagacagcgaagcaactcattccaattatc
agcgagtatctgctctccaatttgagaggagtcgcacattgtgtgaatatccataaccaa
cagcacatcttggtaatgtgtgcagctgctttctatttgattgagaattacccacttgat
gtagggcctgaattctctgcaggaattatacagatgtgtggagtcatggtgtctggaagt
gatgaatcaacaccatccattatttatcattgtgtcctgagaggattagaacgactcctt
ctttcagagcaactttctaggctggatagtgaatcattggttaaactgagtgttgacaga
gtgaatgtgcagagcccccatagagcaatggcagcacttggattaatgctgacttgcatg
tacacaggaaaggaaaaaatcagccccagtcgtaccacagatgcaaatcctgctgctcct
gacagtgaatctgtgattgtagctatggaacgagtatctgtcctttttgacaggatcaga
aagggatttccttttgaagctagagtagtggctcggatccttccacaattcctcgatgat
tttttccccccacaagatgtaatgaataaagttattggagaatttttatccaatcagcag
ccttacccacaattcatggcaacagtagtttataaggtattccagacactacatagcact
ggacagtcttcaatggtccgtgactgggtgatgctgtctctctctaatttcacacaaaga
acacccgtggcaatggcaatgtggagtctttcctgtttttttgtcagtgcttcgaccagt
caatggatttcagcaattcttccacatattatcagcagaatgggaaaatcagagcaagtg
gatgttaacatcttctgtttggtggccatagacttctaccgacatcagatagatgaagaa
ttagatcggagggcctttcagtcggtgtttgaggtggtagcatctccaggaaccccatat
catcgcttactaacttgtttgcaaaatgtccacaaggtcacagcatgttga
DBGET
integrated database retrieval system
