Strix uralensis (Ural owl): 141943121
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Entry
141943121 CDS
T11361
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
sura Strix uralensis (Ural owl)
Pathway
sura04140
Autophagy - animal
sura04142
Lysosome biogenesis
sura04145
Phagocytosis
sura04148
Efferocytosis
sura05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sura00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
141943121 (VPS18)
04142 Lysosome biogenesis
141943121 (VPS18)
04140 Autophagy - animal
141943121 (VPS18)
04148 Efferocytosis
141943121 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
141943121 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sura04131
]
141943121 (VPS18)
Membrane trafficking [BR:
sura04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
141943121 (VPS18)
Hops complex
141943121 (VPS18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_solenoid_2nd
VPS18_solenoid_1st
VPS18_RING_C
Clathrin
zf-RING_Vps41
zf-C3HC4_2
zf-RING_16
aq_1631
zf-ANAPC11
zf-RING_UBOX
zf-RING_5
zf-RING_11
Lact-deh-memb
zf-RING_2
zf_RING_Vps8
DUF5600
DUF8221
Nup54_57_C
zf-rbx1
LETM1_C
STX17_N
RBSN_mid
zf-C3HC4
DUF1664
KNOX2
Motif
Other DBs
NCBI-GeneID:
141943121
NCBI-ProteinID:
XP_074723896
LinkDB
All DBs
Position
4:90715845..90727585
Genome browser
AA seq
974 aa
AA seq
DB search
MASILDEYEDSLYRSASVQQSRASVGIPHSGYVNARLEKETPIFNKQRIDFAPPEKINSL
VVSSNQLCMSLGKDTLLRIDLGKPDEPNQVELGRKDEAKVYKMFLDHTGSHLLIALNTSE
CLYLNRSVQKVRALSRWKGHLIESVGWNKFLGSETNTGPILVGTAQGQIYEAEISVSEGS
LFSTNPDQYFRQVYTLEEESGPAPVCCLEIERGIEGKFFIIATTRKRLFQFVGKVPEGTE
QQGFSSIFAMHADHLPSFREFPANFGFSEIAFYTPKLRSNPRSFAWMMGNGVLYGTLDYS
RPDSILSDERVWVYPSDIDITVNKPISIVLTQFHFLLLLPDRVKAVCTLNGQVVFQDLFL
EKFGLLTRMIKDPTVQQIWIHTEKVVFRYHVQRESRDVWKMYMNMNKFDLAKEYCKDRPE
CLDIVLAKEAEHCFQNKRYLDSAKCYALTQNYFEEIALKFIEAKQEEALMEFLLKKLSNL
KPSEKTQTTLLTTWLTELYLNWLGILEGDPSQRNLYLDTREKFRTFLSSPKNKDCLFNNR
ASIYELLASHGDTEHMVYFAVIMQDYERVVAHHCQHDEYDEALNVLSRHRDEKLFYKFSP
VLIQHIPKKVVDAWISMGSRLDARNLIPALVNYSQSASTQQINEAIRYMEFCVYQLEETQ
QAIHNYLLSLYALCRPDSLLSYLEQAGTNPNRIHYDLKYALRLCAEHGHHHACVHIYKVM
ELYEEAVDLALQVDVDLAKSCADLPEDDEELRKKLWLKIARHVVQEEKDVKKAMACLSSC
ALLKIEDVLPFFPDFVTIDHFKEAICNSLEDYNKHIEELKREMEEATQSAKRIREDIQEM
RNKYGSVEPQEKCAACDFPLLNRPFYLFLCGHMFHYDCLLQAVFSNLPAYKQAKLEDLQK
KLAATSQPSKSHHRPKDTDTISLGKGQQSREQIKADIDDIVAAECVYCGELMIRSIDKPF
IDPQKYEEEMQSWL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcctctatcctggacgagtacgaggattccctgtaccgctccgcctccgtgcagcag
agccgcgccagcgtgggcatcccgcactccggatatgtgaatgcacgactggagaaggaa
acgccaatatttaacaagcaaaggattgattttgctcctccggagaaaattaacagctta
gtggtctcctctaaccagctctgtatgagccttggcaaagacacccttctcaggattgat
cttgggaagccagatgaacctaatcaggtagagctgggacgcaaagatgaagccaaagtc
tacaagatgtttttggaccacacaggctctcatctcctgattgctctgaacaccagtgaa
tgcctttacctgaacagaagtgttcagaaggtgcgagcactctcccgctggaaaggccac
ttgattgaaagtgtgggctggaacaaatttcttggttcagagaccaacactgggcctatc
ctggtggggacagcccagggacagatctatgaggccgaaatctctgtcagtgagggaagc
ctcttcagcactaatcccgaccagtacttccgacaggtctacactctggaggaggaatca
ggacctgccccagtctgctgcttggagattgaacgagggatagaagggaaattttttatt
atagccaccactcgaaagagactcttccagtttgtaggcaaagtgcctgaagggacagag
cagcaaggcttcagctctatatttgctatgcatgctgaccatttgcccagcttccgggag
ttcccggccaactttggtttcagtgagatagccttttacaccccaaaattgcgctccaac
ccacgctcctttgcctggatgatgggaaatggtgttttatatggtacattggattatagc
cgtcctgattcaattctgagtgatgaacgggtctgggtttatccttctgatattgacata
actgtgaacaagccaatatccattgtactcacccagttccacttcctgttgctgctgcct
gaccgggtgaaggctgtatgcactctgaatgggcaggttgtttttcaagatctgttcttg
gagaagtttggcttactgacgcgtatgatcaaagatcccacagtccagcagatatggatc
cacactgagaaagtagtgttccgctaccacgtccagcgggaatctagagacgtgtggaag
atgtatatgaatatgaacaaatttgatttagccaaagagtattgtaaggaccgtccagag
tgcctagatattgtgctggcgaaagaagcagagcactgcttccaaaacaagaggtatcta
gatagtgccaaatgttatgcgctgacccagaactactttgaggaaattgcccttaagttc
attgaagccaagcaagaagaggccctgatggagtttctgcttaagaagctaagtaaccta
aagccttctgagaagacacagaccactctgctgaccacatggttaacagagctgtacctg
aactggctaggtatactggaaggagatccctcacagcgaaatctctatttggatacacgg
gagaagtttcgcactttcctgagcagtcctaaaaacaaggactgtctatttaataaccgg
gcatccatttatgagctgttggcaagccatggagacacggagcacatggtctattttgca
gtcatcatgcaggactatgagcgcgtagtagctcaccactgccagcacgatgaatatgat
gaagctctaaatgtgctgtccaggcacagagacgagaagctgttctacaagttctctcca
gtcctcatccagcatattcccaagaaggtagttgatgcttggatttctatgggctctaga
ctggatgccaggaacctcattccagcccttgttaactatagccagagtgccagcacccag
cagatcaatgaagccattagatatatggagttctgtgtctatcagttggaggaaacccag
caagccattcacaactatctgttgtctctttacgctttgtgtcggccggactcactgcta
tcatacctggagcaagcaggaaccaacccaaacaggatccactatgacctgaagtatgcg
ttacgcctgtgcgcagagcacgggcaccaccacgcatgtgtccatatctacaaagtgatg
gaattgtatgaggaggctgtggatctcgccttacaggtggatgttgatcttgccaagtcg
tgtgcagatctccctgaagatgatgaggaactccggaagaagctctggttgaagattgct
cgccacgttgttcaggaagagaaggatgtcaagaaggcaatggcctgcctctccagctgt
gccctgctgaagattgaagacgtcctgccattctttccagactttgtcactattgaccat
ttcaaggaggcaatctgtaactccctggaggactacaataagcacattgaggagctgaaa
agggagatggaggaagccacacagagtgccaagagaatcagagaggacatccaggaaatg
cgaaataagtatggctctgtggagcctcaggaaaaatgtgctgcttgtgactttccactt
ctaaaccgccctttttaccttttcctgtgtggtcacatgtttcactatgactgtctcctc
caagcagttttctcaaaccttcctgcctataagcaggcaaaacttgaagaccttcagaag
aagctggcagctaccagtcagccttccaagagccaccatcgtcccaaggacacagatacc
attagcttggggaaggggcagcagagccgggaacagatcaaagctgacattgatgatatt
gtggcagctgaatgtgtgtactgtggcgagctgatgatccggtccattgacaagcctttt
attgatccccaaaaatatgaagaggagatgcaaagctggctgtag
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integrated database retrieval system
