Strix uralensis (Ural owl): 141943702
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Entry
141943702 CDS
T11361
Symbol
PDZRN4
Name
(RefSeq) PDZ domain-containing RING finger protein 4 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
sura Strix uralensis (Ural owl)
Brite
KEGG Orthology (KO) [BR:
sura00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sura04121
]
141943702 (PDZRN4)
Enzymes [BR:
sura01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
141943702 (PDZRN4)
Ubiquitin system [BR:
sura04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
141943702 (PDZRN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-C3HC4_4
zf-RING_5
zf-C3HC4_3
zf-rbx1
PDZ_Tricorn
TRAF3_RING
Prok-RING_4
IBR_1
Motif
Other DBs
NCBI-GeneID:
141943702
NCBI-ProteinID:
XP_074725454
LinkDB
All DBs
Position
5:33058978..33324450
Genome browser
AA seq
1042 aa
AA seq
DB search
MGFDPSRFAAPVAAELQCKLCGRVLEEPLSTPCGHVFCAGCLLPWAARRRRCPLRCRPLA
AAELRPVLPLRSLVQKLEVKCDYSPRGCGRTVRLRELPAHLAACRYGPPPPGPAAEPEPR
GRPPPGRSGGGSAGQPRRPAAAAPLRPGQRCPRALRSGGGPEPGPELKREALRWSRREKS
LLAQLSALQSEVQLTARRYQAKFGQYMSHISSIARDLAGSQPGTGGEPKPLTIMLHREND
TLGFNIIGGRPDQNNQEESAEGIYVSKILENGPADKAEGLQIHDKIIEVNGKDLSKATHE
EAVEAFRNAKEPIVVQVLRRAPISKAHGSSQDVRLVDASTQTDITFEHIMALAKLRPSTP
PVPDICPFLLSDSCHSLHPVEHEFYEGNEYLSSLPADADRAEDFEYEEVELCRISSQEKL
GLTVCYRTDDEEDTGIYVSEVDPNSIAARDGRIREGDRILQINGQDVQNREEAVALLSSE
ECKKIVLLVARPEMQLEEGWLDDERSEFLEDLNLEMLEEQHNEAMQYTANEAEQPKKHEE
EDGTTDTATSSSNNHEKDSGVGPTDESLRNDESSEQENAPEEQNSTTLQSKRELGHSQDT
LGSVELQCNESFVSGEYIESDFIGNPEEECERFRQLLELKCKIRNHGDYDLYYSRSMIEC
NRREQDGVEHELQLLNEELRNIELECQNIMQAHRLQKVRDQYGDIWALHDEGFRNYNTSI
DVQRGKLDDIMEHPEKSDKDSSSAYNTAESCRSTPLTVERSPDNSLQRMISITNRKNLRS
TIVANQSSSGQSNRETTSTKTKPTEQNSAAENAVLASESSKFTDQEKQSSEHIPYLSPYH
SSSYRYGNIPAHAKHYQSYMQLIQQKSAVEYAQSQLSLVSMCKDSQKCAEPKMEWKVKIR
SDGTRYITKRPVRDRILKERALKIKEERSGMTTDDDTMSEMKMGRYWSKEERKQHLVRAK
EQRRRREFMMRSRLECLKESPQSGSEGKKEINIIELSHKKMMKKRNKKILDNWMTIQELM
THGAKSPDGTRVHNAFLSVTTV
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgacccgtcgcgcttcgcggcgccggtggcggcggagctgcagtgcaagctg
tgcgggcgggtgctggaggagccgctgtccacgccgtgcgggcacgtcttctgcgccggc
tgcctgctgccctgggcggcgcggcggcggcgctgccccctgcgctgccggccgctggcg
gccgccgagctgcgccccgtcctgcccctccgcagcctcgtccagaagctggaggtcaag
tgcgactacagcccgcggggctgcggccgcaccgtgcggctgcgggagctgcccgcccac
ctcgcggcgtgccgctacgggccgccgccgcccggccccgccgccgagccggagccgcgg
ggccgccccccccccggccgctcggggggcggctccgcggggcagccgcggcggccggcg
gcggcggcgcccctgcggcccgggcagcgctgcccacgggcgctgcggagcggcggcggc
ccggagccgggtcccgagctgaagcgggaggccctgcgctggagccggagggagaagtcg
ctgctggcgcagctctcggcgctgcagagcgaggtgcagctgacggcgcggcggtaccag
gcgaagttcggccagtacatgagccacatcagcagcatcgcccgggacctggcgggcagc
cagcccggcacgggaggagaacccaaaccattaacgatcatgctacaccgagaaaatgat
actttgggattcaatattattggaggacgacccgatcagaacaatcaggaggaatctgct
gagggaatttatgtgtcaaagattttggaaaatggacctgcagacaaagcagaaggcctg
caaattcatgacaagattattgaggtcaatgggaaggacctctccaaagccactcacgaa
gaggcagtggaagcttttcgcaatgccaaggagccaattgtagttcaggttttacgacga
gccccaattagcaaagctcacggtagctctcaggatgttcggctcgtggatgccagcact
cagactgacatcacttttgagcacattatggctctggccaaactaaggccttccacacca
ccagttcctgatatctgcccttttctactttcagacagctgccattctcttcacccagtg
gagcatgaattttatgaaggtaatgagtatctttccagcctgcctgctgatgcagataga
gcagaggactttgagtatgaggaggtggagctgtgccgcattagcagccaggagaagctg
gggctgactgtttgttacagaactgatgatgaggaggacacggggatctatgtcagcgag
gttgatccaaacagcattgctgccagagatggccggatccgtgaaggagaccgcattttg
caaataaatggccaagatgtccagaatcgggaagaggcagtggcattgctctccagtgaa
gaatgcaagaaaattgtgttgctggttgcaagaccagagatgcagctggaggaagggtgg
ctggatgatgaaaggagtgaattcttagaggacttaaacttggaaatgttggaagaacag
cataatgaagcaatgcagtacacagccaacgaggcggagcagccaaagaaacatgaagag
gaggatggcactacagacactgcaacctcatcgtccaacaatcatgagaaggacagtgga
gtgggacctacagatgaaagtctgcgtaatgacgagagctcggagcaagaaaatgcacct
gaggagcagaacagcactactctgcagagcaaaagagagctgggccacagccaagatacg
ttaggaagtgttgagctccagtgcaatgaaagctttgtgtctggggaatacattgaatct
gatttcataggaaacccagaggaggaatgtgaaaggtttcggcagctgttggaattgaag
tgcaagattcgaaaccatggggactatgacctgtattactcaagaagcatgatagagtgc
aacagaagagagcaagatggagtggagcatgagctgcagctactcaatgaggaactgaga
aacattgaacttgaatgtcagaatattatgcaagctcaccggctccaaaaggtgagggat
cagtatggagacatttgggctttacatgatgaagggttcaggaattataacaccagcata
gatgtacaaagaggcaaactggatgacatcatggagcaccctgagaagtctgacaaggac
agctccagcgcctacaacacagccgaaagttgcaggagcactccgctgacagtggagcga
tcccctgataactctctccagagaatgatcagcataaccaacaggaaaaacctgaggagc
acaatcgtggctaatcagtcatcctcaggacaaagcaacagggagacaacctcaaccaaa
accaaacccactgagcaaaacagtgctgctgagaatgcagtgttggcttcagaaagcagt
aaattcacagaccaggaaaagcagagcagcgagcacattccctacctgtctccatatcac
agctcttcttacaggtacgggaatatacctgctcatgcaaagcattatcaaagctatatg
cagctgatccagcagaagtctgctgtggagtacgcccaaagccagctcagcctggtgagc
atgtgcaaagactcgcagaagtgtgcagagcccaagatggaatggaaagtgaaaataagg
agtgatgggacgaggtacatcacaaagagaccagttcgagacagaatcctaaaggaacgt
gccttaaaaattaaagaggagcgcagtgggatgacgacagatgatgatacaatgagtgag
atgaagatgggtcgctactggagcaaagaagagcggaagcagcatttggtgcgagctaag
gagcagaggaggaggcgagagtttatgatgaggagcaggctggagtgtcttaaggaaagt
ccgcagagtggcagcgagggcaaaaaggaaattaacatcattgaactgagtcacaaaaag
atgatgaaaaagagaaacaagaaaatcttggacaactggatgacaatccaagaactgatg
acacacggtgctaaatctccagatggcacaagagtgcacaatgcctttttatcagttact
actgtatga
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integrated database retrieval system
