Strix uralensis (Ural owl): 141945044
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Entry
141945044 CDS
T11361
Symbol
COL6A2
Name
(RefSeq) collagen alpha-2(VI) chain isoform X1
KO
K06238
collagen type VI alpha
Organism
sura Strix uralensis (Ural owl)
Pathway
sura04510
Focal adhesion
sura04512
ECM-receptor interaction
sura04518
Integrin signaling
sura04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sura00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
141945044 (COL6A2)
04518 Integrin signaling
141945044 (COL6A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
141945044 (COL6A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
141945044 (COL6A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sura04147
]
141945044 (COL6A2)
00536 Glycosaminoglycan binding proteins [BR:
sura00536
]
141945044 (COL6A2)
Exosome [BR:
sura04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
141945044 (COL6A2)
Glycosaminoglycan binding proteins [BR:
sura00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
141945044 (COL6A2)
Hyaluronan
Extracellular matrix or blood plasma proteins
141945044 (COL6A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
141945044
NCBI-ProteinID:
XP_074728501
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Position
6:complement(940979..969584)
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AA seq
1019 aa
AA seq
DB search
MFRQAFFSTLLCVALVPLHAQLDVDTGDVSPVSCAEKRNCPINVYFIIDTSESVALQTVP
IQSLVDQIKRFIPVFIDKLENELYQNQVYITWQFGGLHYSDVVEIYSPLTSSKDIYLPRL
SAINYLGRGTFTDCAISNMTEQIQTQMASGVNFAIVITDGHVTGSPCGGMKVQAERARDM
GIKLFAVAPSENVYEQGLREIANLPHELYRNNYAITQKDTLDIDVNTIDRIIQAMKHEAY
GECYKMSCLEITGPPGPKGYRGQKGAKGNMGEPGSPGLKGRQGDPGIEGPIGYPGPKGVP
GLKGEKGEIGSDGRRGAAGLAGRNGTDGQKGKLGRIGPPGCKGDPGDKGPDGYPGDAGDQ
GERGDEGIKGDPGRPGRSGPLGPPGEKGSPGLPGNPGPQGPPGSKGRKGETGPPGPKGEP
GRRGDPGTKGSKGTPGAKGERGDPGTEGPRGLPGEVGSKGARGDQGLPGPRGPSGAVGEP
GKIGSRGDPGDLGPRGDAGPPGPKGDRGRPGFSYPGPRGPQGDKGEKGQPGPKGVRGELG
PKGVQGTKGQKGEPGDPGPGGEPGPRGPTGEPGLEGTPGPPGDPGLTDCDVMTYVRETCG
CCDCEKRCGALDIMFVIDSSESIGYTNFTLEKNFVVNVVSRLGSIAKDPKSQTGARVGVV
QYSHEGTFEAIKLDDERIDSLSSFKEAVKRLEWIAGGTWTPSALQFAYNKLIKESKREKA
QVFAVVITDGRYDPRDDDKNLGALCGRDVVVNTIGIGDMFDQPEQSETLVSIACNEPQRV
QKMRLFSDLVAEEFIDKMEDVLCPDPQIVCPELPCQTELAVAQCTQRPVDVVFLLDGSER
IGEQNFHRAHHFVEDVARQLTLARTNSDNMNARIALLQYGSERDQDVVFPLTYNLTEISN
ALAQIKYLDSSSNIGSAIIHAINNIVLSPGDGQRLARRNAELSFVFITDGITGSKNLEEA
INSMKKQDVMPTVVALGSDVDMDVLLKLGLGDRAAIFREKDYDSLSQPSFFDRFIRWIC
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgttccgacaagcctttttttccactctcctttgtgtggctctagttcctctccatgct
cagcttgatgtggatactggagatgtcagtcctgtctcctgtgcagaaaagaggaactgc
cccatcaatgtgtacttcatcattgacacctcggagagcgttgctctgcagactgtgcct
atccagagcctcgtggatcaaataaagcggttcatccctgtgttcatcgataaactggag
aatgagctctaccagaaccaagtctatatcacttggcagtttggtggacttcattactca
gatgtggtggaaatttacagccctttaacaagcagcaaagacatatacctccccaggctg
tctgctattaactaccttggccggggcaccttcacggactgcgctatctccaacatgacg
gagcagatccagacacagatggcttcaggcgtgaactttgcaatagtcatcaccgatggc
cacgttactggcagcccctgcggggggatgaaggtgcaggctgagagggcacgagacatg
gggatcaagctcttcgcagtggcccccagcgagaacgtctacgagcaggggctgcgggag
atcgccaacctgccgcatgagctgtaccgcaacaactatgccatcacgcagaaggacacc
ctggacatcgatgtgaacaccatcgacaggataatccaagctatgaaacacgaagcctac
ggagagtgctacaagatgagctgcctggagattacaggtccacctggtcccaagggatac
cgagggcagaagggtgcaaaggggaacatgggcgagccaggctcccctgggctgaaggga
cgacagggtgacccaggtattgaaggtccgatcggataccctggtcccaagggtgtccca
gggctgaaaggagagaagggcgagattggatccgatggacggaggggtgccgctggtttg
gcaggcaggaatggcaccgatggacagaagggcaagctggggagaattggaccaccgggc
tgcaagggagaccccggtgacaagggccctgatggctacccaggagatgcaggagaccaa
ggtgaaagaggagatgaaggcataaagggagatcctggtcggcccggtcgcagcggaccc
ctgggacctccaggagaaaaaggaagcccgggacttccaggcaaccctggacctcaaggg
cctcctggaagtaagggaagaaaaggtgaaacgggacctcctggacccaaaggagagcct
ggtcgacgtggagatccagggacgaaaggcagcaaaggtactcctggagccaaaggagaa
agaggagatcctggtacagagggtcctcgtggcctgcccggtgaggttggaagcaaagga
gcaaggggagaccaaggactgccaggaccccgaggcccttcaggtgctgtaggagagcca
gggaagataggatcgcgtggggaccctggtgacttgggcccaagaggtgacgccgggcca
ccaggaccaaagggtgacagaggcagacctggctttagctatcctggacccagaggaccg
cagggtgacaagggtgagaagggtcaaccaggacccaagggagtaagaggtgaacttggg
ccaaaaggagtgcaagggaccaaaggacagaagggggaaccgggtgatcctggcccagga
ggggagcccggaccccgcggtccaactggtgaaccaggcctcgagggaacccccggccca
ccaggagatcctggcctgactgactgcgacgtgatgacctacgtgcgagagacgtgcgga
tgctgtgactgtgagaagcgttgcggtgccctggacatcatgtttgtcatagacagctcg
gagagtattggctacaccaacttcaccctggagaaaaattttgttgtcaacgtggtcagc
cggctgggctctattgccaaggaccccaagtcacagacaggtgcccgtgttggggtggtg
cagtacagtcacgaggggaccttcgaagccatcaagcttgatgatgagcgcattgattca
ctgtcgagcttcaaagaagcagtaaagcgcctggagtggatcgctggaggcacctggaca
ccatctgcccttcagtttgcctacaacaagctcatcaaggaaagcaagcgagagaaagcc
caagtgtttgctgtggtgatcacagatgggcgctacgacccccgggatgatgacaagaac
ctaggggctctttgcggtagagatgtggttgtcaacactattggcattggagacatgttt
gatcagccagaacagagcgagaccctggtctccattgcctgcaatgaaccccagcgagtc
cagaagatgaggcttttctcagacctggtggcagaggaattcattgacaagatggaggac
gtgctctgcccagatccacagattgtctgtcctgagctgccctgtcagacagagcttgcg
gtggctcagtgcacgcagcgccccgttgacgttgttttcttgcttgatggctctgaaagg
atcggggagcagaatttccacagagcccaccactttgtagaggacgtggcccgacagctc
acgttggccaggaccaacagtgacaacatgaatgcccggattgcgctgctgcagtacggc
agtgagagggaccaggatgtggtcttcccactgacctacaacctgacagaaatctccaat
gccctggcacagatcaagtacctggactcatcctccaacatcgggtcagccatcatacac
gccatcaacaacatcgtgctcagcccgggagatgggcagcgactcgcccgtcgcaatgct
gagctctcctttgtcttcatcactgacggcatcacaggaagcaagaacctcgaggaggcc
atcaactccatgaagaagcaagacgtcatgcccacagtagtggctctcgggagtgatgta
gacatggatgtcctgctgaagcttggccttggggaccgggcggccatcttccgggagaag
gactatgacagcctctcccagcccagcttcttcgacaggttcattaggtggatatgttaa
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