Strix uralensis (Ural owl): 141945402
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Entry
141945402 CDS
T11361
Symbol
ERCC3
Name
(RefSeq) general transcription and DNA repair factor IIH helicase/translocase subunit XPB
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
sura Strix uralensis (Ural owl)
Pathway
sura03022
Basal transcription factors
sura03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sura00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
141945402 (ERCC3)
09124 Replication and repair
03420 Nucleotide excision repair
141945402 (ERCC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sura03021
]
141945402 (ERCC3)
03400 DNA repair and recombination proteins [BR:
sura03400
]
141945402 (ERCC3)
Enzymes [BR:
sura01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
141945402 (ERCC3)
Transcription machinery [BR:
sura03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
141945402 (ERCC3)
DNA repair and recombination proteins [BR:
sura03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
141945402 (ERCC3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_22
AAA_34
Motif
Other DBs
NCBI-GeneID:
141945402
NCBI-ProteinID:
XP_074729625
LinkDB
All DBs
Position
6:29332690..29354991
Genome browser
AA seq
781 aa
AA seq
DB search
MGRKERDKKKSKKRHYDDDDDDEDEAPGKESQEAVPSAAGKQVEDSGTKVDEYGAKDYRH
QMPLKADHASRPLWVAPDGHIFLEAFSPVYKYAQDFLVAIAEPVCRPTHIHEYKLTAYSL
YAAVSVGLQTSDITDYLQKLSKTGVPDGIIQFIKLCTVSYGKVKLVLKHNRYFVESTHPD
VIQQLLQDHVIRDCRLRNAEGEETELITETFTSKSAISKSSESGFGPSTSQGADAQIKPD
VAADLFEFYEQMDKDDDDEEEETQTVSFEVKQEMIEELQKRCIHLEYPLLAEYDFRNDSV
NPDINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCL
VLGNSAVSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSIAISTYSMLGHTTKRSWE
AERVMEWLKSQEWGLMILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDLNF
LIGPKLYEANWMELQNSGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNKFR
ACQFLIKFHERRNDKIIVFADNVFALKEYAIRLGKPYIYGPTAQGERMQILQNFKHNPKI
NTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAFFYSL
VSQDTQEMAYSTKRQRFLVDQGYSFKVITKLAGMEEEELSFSSKEEQQQLLQKVLQASDL
DAEEEVVAGEYGSKSAQVSRRTGTMSSMSGADDTVYMEYHSSRSKASSNKHIHPLFKRFR
K
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgggcaggaaggagcgggataagaagaagtccaagaagcgccattacgatgatgacgac
gacgatgaggacgaagctcccgggaaggagtcgcaggaggcggtgccgtccgcggcgggg
aagcaggtggaggacagcggcaccaaagtggacgagtacggggcgaaggactacaggcac
cagatgcccctgaaggccgaccacgcctcgcggcccctctgggtggctcctgatggccat
atttttctggaagccttttctccagtttacaagtacgcacaggattttttggttgctatt
gctgagcctgtgtgcagaccaacccacattcacgagtacaagctgactgcttactcactg
tacgctgctgttagcgttggcttacaaacaagtgatatcacagactacttacaaaaactg
agcaaaactggtgtcccagatggaataattcaatttatcaagctgtgtactgtcagctac
gggaaggtgaagctggtactgaaacataacaggtattttgtggaaagtacccatcctgat
gtcattcagcagcttctgcaagaccatgtaatcagagactgtcgcctgagaaatgctgag
ggtgaagaaacagagcttattacagagacattcacaagtaaatcagcgatttccaaatcc
agtgaaagtgggtttggtccgtccacatcacagggagcagatgctcagattaagccagat
gtcgcggctgacttatttgagttttatgaacagatggacaaagatgatgatgatgaggag
gaggaaacacagacagtgtcttttgaagtcaagcaagagatgattgaagaacttcagaag
cgttgtatccatttggagtaccccttgctggcagaatatgatttcagaaatgattctgtg
aatcctgatattaatatcgatttgaaacctacagctgtcctcaggccctatcaagagaaa
agtctaaggaagatgtttggaaatgggcgagccagatctggtgttattgtcttgccatgt
ggtgctggcaagtctctagttggcgtgacggctgcgtgtaccgtccgcaagcggtgcctg
gtccttggtaattctgcagtgtctgtagagcagtggaaagctcaattcaagatgtggtcc
accatcgacgacagtcagatctgccggttcacttctgatgccaaagacaagcccattggc
tgttccattgctatcagcacatattccatgttggggcacacaactaaaaggtcctgggaa
gcagaaagagtaatggagtggcttaaaagtcaagagtggggccttatgatacttgatgaa
gtacatactatccctgcaaaaatgttcagacgtgtgctcactattgtacaagctcattgt
aaactggggctgactgctaccctggtcagagaagatgataaaattgttgacctgaacttc
ctgatcggaccaaagctctatgaagccaactggatggagctgcagaacagtggctacatt
gctaaagtccagtgtgctgaggtttggtgcccaatgtcacctgaattttatagagaatat
gtagctatcaaaacgaagaagcgaatactgctgtacaccatgaacccaaacaaattcaga
gcctgccagttcctgattaagtttcatgagcgacggaatgataaaatcatcgtatttgct
gacaatgtgtttgcattgaaggagtatgcaatcagacttgggaaaccctatatatatggt
cccactgcacaaggcgaaagaatgcaaattctacaaaacttcaagcacaatccaaaaatc
aacactattttcatttccaaggtaggtgacacatccttcgatctgccagaagccaatgtt
ctgattcagatttcatcccatggtgggtctcgaagacaggaggctcaaagactgggacga
gtgctgagagccaaaaaaggcatggttgcagaggaatacaatgcctttttttattctctt
gtatcccaagacactcaggaaatggcatattcaacaaagcgacaacggtttcttgtagat
caaggttatagcttcaaggtaataacaaagcttgctggcatggaagaagaagaactttca
ttttcatccaaagaagaacagcagcagcttctccagaaagtcctgcaagcctctgacctg
gatgctgaggaggaagtagtcgctggagaatatggttcaaagtcagctcaggtgtcacgt
cgtacgggcacgatgagctctatgtcaggagcagatgatacggtttacatggaataccac
tcttcacggagtaaggcatcttcaaataaacacatccatccactatttaaacgcttccgg
aaatga
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