Strix uralensis (Ural owl): 141946595
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Entry
141946595 CDS
T11361
Symbol
COL11A1
Name
(RefSeq) collagen alpha-1(XI) chain isoform X1
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
sura Strix uralensis (Ural owl)
Pathway
sura04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sura00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
141946595 (COL11A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
sura00536
]
141946595 (COL11A1)
Glycosaminoglycan binding proteins [BR:
sura00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
141946595 (COL11A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
141946595
NCBI-ProteinID:
XP_074732755
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Position
8:complement(22481725..22646204)
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AA seq
1807 aa
AA seq
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MEMQRWSTRWKTRRWPWESAVTVLITFAILLRAAEVRGAEPIDVLKALEFHNSPEGVSRT
AGFCTNRRDSKGSDVAYRVSKTAQLSAPTKQLYPGGDFPEDFSILMTVKPKKGIQSFLLS
VYNEQGIQQVGVEVGRSPVFLFEDQNGKPAPEDYPLFRTVNIADGKWHRVAISVEKKSVT
MIVDCNKKTTKPLERSDKTVVDTNGITVFGTRILDEEVFEGEIQQLLIIADPRAAYDYCE
HYSPDCDSPVPNAAQAQDPQVDEYTPEDFIEYDYEYGDADYKETDSVTEGPPLFEETVAQ
TEANVVDGFQEYSIAENDYGPQTEAPSRTTEANEQNPVEEVFAEEYITGEDYDKKTEETE
YGSRGVDLSESDLLVDGDLGEYDFYEYKEYEEKPTDSTNEEFGPGVPAETDITETSVTGH
GAYGEKGQKGEPAVIEPGMLIEGPPGPRGPAGLTGPPGLQGPVGPPGDPGERGPPGRPGL
PGADGLAGPPGTMLMLPFRFGGDGEKGPTISAQEAQAQAILQQARIAMRGPPGPMGLTGR
PGPVGGPGAAGAKGESGEPGPQGPRGVQGAPGPSGKAGKRGRPGADGARGMPGEPGAKGD
RGFDGLPGLPGDKGNRGDRGPQGPPGLPGEDGSRGEDGEVGPRGLPGEAGPRGLLGPRGT
PGPPGQPGIAGVDGPSGPKGNMGPQGEPGPPGQQGIPGPQGLPGPQGPIGPPGEKGPQGK
PGLPGLPGSDGPPGHPGKEGQSGDKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGE
KGEDGFPGFKGDMGLKGDRGEIGQPGPRGEDGPEGPKGRAGPSGDPGAAGPAGEKGKLGV
PGLPGYPGRQGPKGSTGFPGFPGSNGEKGARGLHGKPGPRGQRGPTGPRGSRGPRGPTGK
PGPKGTAGNDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGK
TGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGIPGK
DGPAGLRGFPGERGLPGAQGPAGLKGGEGPQGPPGPVGSPGERGAAGTAGPIGLPGRPGP
QGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPSGSPGEDGDKGEIGEPGQKGS
KGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGPRGFPGPPGPIGL
QGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSIGSVGGVGEKGEPGE
AGNPGPPGESGTSGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGP
PGEPGPAGQDGVGGEKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGATGAEGRQGEKGA
KGEPGAEGAPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAPGQDGPPGPLGPPGL
PGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSPGAKGDAGISGPAGPLGP
PGPPGLPGPQGPKGSKGSSGPAGQKGDSGLPGPPGPPGPPGEVIQPLPIQSPKKTRRSPD
YMLSDAGDNILDYSDGMEEIFGSLNSLKQDIEHMKYPMGTQNNPARTCKDLQLCHPDFPD
GEYWIDPNQGCSGDSFKVYCNFTAGGETCIYPDKKSEGVRISSWPKENPGSWFSEFKRGK
LLSYLDVEGNSINMVQMTFLKLLSASARQNFTYNCHQSVAWHDASSDSYDRALRFLGSND
EEMSYDNNPYIKALHDGCASRKGYAKTVIEINTPKIDQVPIVDVMINDFGDQNQKFGFEV
GPVCFLG
NT seq
5424 nt
NT seq
+upstream
nt +downstream
nt
atggagatgcagagatggtccacaaggtggaaaacgagaaggtggccctgggagtcggcc
gtaaccgtgctcatcaccttcgctatccttctccgggctgcagaggtcagaggagctgaa
cccattgatgtgctaaaagcattagaatttcacaattcaccagaaggggtatcaagaaca
gcaggattttgcacaaacagaagggattcaaaaggatcggatgtcgcctacagagtttca
aaaactgcacagctgagtgccccaacaaagcagctgtacccaggtggagattttccagaa
gatttttcaatattaatgacagtaaaacctaaaaaaggtatccagtccttccttctgtct
gtctacaatgagcaaggaattcagcaagtaggtgttgaagttggtagatcccctgtcttc
ctgtttgaagaccaaaatggaaaacctgccccagaagactatcctcttttcagaacagtc
aacattgctgatggcaagtggcatcgagtagctattagtgtggagaaaaaaagtgttaca
atgattgttgactgtaacaaaaaaactacaaaaccacttgaaagaagtgacaaaacagtt
gtggacaccaatggcatcactgtctttggaaccaggattctggatgaagaagtttttgag
ggtgagatccagcagctgttgattatagctgaccccagagctgcatatgactattgtgag
cattatagcccagactgtgattccccagtgcccaatgctgctcaggctcaagatcctcaa
gttgatgagtacacaccagaagattttatcgaatatgactatgagtatggggatgcagat
tataaagaaactgattctgtaacagagggacccccactgttcgaagagacagtagcacaa
acagaggcaaacgttgttgatggatttcaagagtatagcatagctgaaaatgactatggg
ccccagacagaagctccctccagaactactgaagcaaatgagcaaaatcctgttgaagaa
gtatttgctgaagaatacataactggagaggattatgataaaaaaactgaggaaactgaa
tatggaagcagaggagtagacctcagtgaatctgatctgctggtagatggagatttaggc
gaatatgatttttatgaatataaagaatatgaagagaaaccaactgattccactaatgag
gagtttggtccaggtgttcctgcagagaccgatatcacagaaacaagcgtgactggacat
ggggcttatggagaaaaaggccaaaagggagaaccagctgtgattgaacctggtatgctc
attgaaggaccaccgggaccaagaggacctgctggtcttacaggtcccccaggtctacaa
ggtcctgttggtcctccgggtgaccctggtgaaaggggtccacctggtcgccctggtctc
cctggtgctgatggtttagcaggtcccccaggtaccatgttaatgttgccgttccgtttt
ggaggagatggtgagaagggcccaaccatctcagctcaggaagctcaagcacaagccatt
cttcagcaagctaggattgctatgagaggtccacctggtcccatgggactcactggaaga
ccaggtcctgtgggtggacctggagcagcaggtgctaagggtgaaagtggtgagccaggt
ccccagggtcctcgtggtgttcaaggtgcccctggtccaagtggaaaagctggcaaaagg
ggacgtcctggagctgatggtgctagaggaatgccaggagaacctggtgcaaagggtgac
agaggatttgatggtcttcctggtctccctggtgacaaaggtaacaggggagaccgtggc
ccacagggacctcctggcttacctggtgaagatggatcaagaggagaagatggggaagtt
ggaccaagaggtctcccaggtgaagctggtccacggggattactgggccccagaggtaca
cctggtccgcctggacaaccaggcattgcaggtgttgatggaccttcaggcccaaaagga
aacatgggtcctcaaggggaaccaggacctcctggtcagcaaggaattccaggcccacaa
gggcttcctggtccgcaaggtcctattggacctcctggtgaaaaaggacctcaaggcaaa
cctggccttcctggccttcctggttctgatgggcctcctggtcatcctggcaaagagggt
cagtccggagataaaggtgcattggggcctccaggtcctcagggtccaattggctatcca
ggtcctcgtggtgtaaagggagctgatggtgtccgtggtctcaagggatccaaaggtgaa
aagggtgaagacggttttccaggatttaaaggtgacatgggccttaaaggtgaccgggga
gaaattggccagccaggtccacgaggagaagacggtccagaaggtccaaaaggtcgagca
ggtccatctggggacccaggtgctgctggtccagctggggaaaagggcaagcttggtgta
cccggattgccaggatatccaggaagacaaggcccaaagggctcaactggtttcccagga
tttccaggttccaatggagagaaaggtgcaaggggactacatggcaaaccaggccccaga
ggacagcgaggaccaacaggtccaagaggctcaagaggtcccagaggtcccactggcaaa
ccaggtccaaagggtactgcaggcaatgatggtcctcctggcccaccaggtgaaagggga
ccacaagggcctcagggacctgttggattccctggaccaaagggacctccagggccacct
ggaaaagatggcttgcctgggcacccaggacagcggggcgagactggttttcaaggaaaa
actggtcctcctggtcccggtggtgttgttggccctcagggtcctactggtgagactggc
ccaattggtgaaagaggtcatccaggtcctcctggtccaccaggtgaacaaggcctccca
ggtgctgcaggaaaagaaggtgctaagggtgacccaggccctcagggcattcctgggaaa
gatggaccagcaggtcttcgtggtttccctggagagagaggccttccaggtgctcagggt
ccagctggtctgaaaggaggggaaggcccacaaggcccacctggcccagttggttcacca
ggggaacgtggagcagcaggcaccgctggccctattggtctaccaggtcgtcctggacct
cagggtcctccaggccctgcaggggagaagggtgctcctggtgaaaaaggtcctcaaggt
ccagctggacgtgatggagtacagggtcctgtaggacttcctggtcctgctggtcctagt
ggttctcctggagaagatggtgacaagggtgaaattggtgaaccaggtcagaaaggtagt
aaaggcgacaagggagaaaacggtcctccaggtccaccaggtctccagggtcctgttggt
gcccctggtatagctggaggtgatggggagccaggcccaagaggtcagcaagggatgttt
gggcaaaaaggtgatgaaggtcctcgaggcttccctggccctccaggccctattggttta
cagggtctgcctggcccaccaggtgaaaagggtgaaaatggtgatgtgggaccaatgggt
ccacctggccctccaggtccaagaggtccccagggtcctaatggagctgatggtcctcaa
ggccccccaggctcaatcggctctgttggaggtgttggtgaaaagggtgaacctggagaa
gctggtaaccctggacctcctggagaatctggaacatctggtccaaaaggtgaaagggga
gaaaaaggtgaggctggtccacctggagcagctggaccaccaggtgctaaaggacctcca
ggtgatgatgggcctaagggtaacccaggtccagttggttttcctggagatcctggtccc
cctggggaacctggtccagctggtcaggatggtgttggtggagagaaaggtgaagatggt
gatcctggtcaacctggtccaccaggtccttcaggtgaagctggcccacctggtccacct
ggaaaaagaggacctcctggagcaactggtgctgaaggcagacaaggtgaaaaaggtgca
aagggtgaacctggtgcagaaggggctcctggaaaaacaggtccagttggtccacagggg
cctgcaggaaaacctggcccagagggtctccggggcattcctggccctgtgggagaacaa
ggtctacccggagcgccaggtcaggatggccctcctgggcctctgggtccacctggcttg
cctggcctgaaaggagatccaggttccaaaggagagaagggacatcctggtttgattggg
ctgattggacctccaggagaacagggtgaaaagggtgacaggggtcttcctggcccacag
ggatctcctggagccaagggtgatgcaggaatttccggtcctgctggtccactcggaccc
cctggtcctcctggtttacctggtccccaaggtccaaaaggttccaaaggatctagtggc
cctgctggtcaaaagggtgacagtgggttacctggtccacctggtcctccaggtcctccg
ggtgaggtaatccagccgctgccaatccagtcacccaaaaaaacaagaagatctcctgat
tacatgttatctgatgctggtgataatattctggattattctgatggcatggaagagatc
tttggttcactgaattcactgaagcaagacattgagcatatgaagtatccaatgggcact
cagaataacccagcccgaacttgcaaagacttgcaactttgccacccagacttcccagat
ggggaatattggattgatcctaaccagggctgttctggagactccttcaaagtatactgc
aattttacagcaggtggggaaacttgcatctacccagataagaaatctgaaggagttaga
atttcatcatggccaaaggagaatccaggatcttggtttagtgaatttaagcgaggcaaa
cttctttcctatctggatgttgaaggcaattccattaatatggtccaaatgacattcctt
aaactactgagtgcctctgccagacagaatttcacttacaactgtcatcagtctgtagct
tggcatgatgcatcatctgacagctatgacagagcgctaaggttcttaggatcgaatgat
gaagaaatgtcttatgacaacaatccttacatcaaagctcttcacgacggctgtgcatca
agaaagggctatgcaaagacagtgattgaaatcaacacacccaaaatagaccaagtgcct
atagttgatgtgatgatcaatgactttggtgaccagaaccagaagtttggatttgaggtt
ggtcctgtctgcttccttggttaa
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