Strix uralensis (Ural owl): 141947137
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Entry
141947137 CDS
T11361
Symbol
VPS8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
sura Strix uralensis (Ural owl)
Pathway
sura04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sura00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
141947137 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sura04131
]
141947137 (VPS8)
Membrane trafficking [BR:
sura04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
141947137 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
Beta-prop_WDR36-Utp21_1st
TPR_VPS8_2
zf-RING_Vps41
WD40_CDC20-Fz
TPR_Vps41
zf-RING_11
zf_RING_Vps8_fungal
Clathrin
zf-RING_2
Beta-prop_WDR5
Beta-prop_WDR3_1st
zf-RING_UBOX
WDR55
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
141947137
NCBI-ProteinID:
XP_074734048
LinkDB
All DBs
Position
9:28075187..28161384
Genome browser
AA seq
1416 aa
AA seq
DB search
MEAAPEQGPCPAAAEAEPCPEPPAHRLSVAELDRELDSRSELVRRGPRRGPLLAAGASLP
RIDDKEFDIPQVDTPPTLESILNETDDEEESFVLEDPFLLNIDNTDTHSYDTSSVASSDS
GDRTHLKRKKKLPDSLSLHGSVIRLSLLKGISAQIVSAADKVDAGLPTAIAASNLIAVGT
SHGLALIFDQNQALRLCLGSTAVGAQYGAISALSINNDCSRLLCGFAKGQITMWDLASGK
LLRSITDAHPPGTAILHIKFTDDPTLAICNDSGGSVFELSFKRVMGVRTCESRCLFSGSK
GEVCCIEPLHAKVELRDHPITQYSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVP
LLAWHFVAIQNSVNPMLAFCRGDVVHFLLVKRDDTGAIHVTKQRQLHLHYDLINFTWINS
RTAVLLDSVEKLHVIDRQTQEELETIEISEVQLVYNSSHFKSLATGGNVSEALALVGEKA
CYQSISSCGGQIFYLGTKSVHVMTLRSWRERVDHLLKQERLTDALALAWSFYEGKAKAVV
GLSGDTNKRKAVIADRMVEILLHYADRTLKKCPDQGKIQVMEQHFQDVVPVIVDYCLLLQ
RTDLLFNQIYDKMSENSVAKGIFLECLEPYILSDKLMGITAQVMKDLLLHFQDKNRLENL
EACIVHMDITSLDIQQVVLLCWENRLYDAMIYVYNSGMNDFISPMEKLFKVIAPPLNAGK
SLTDEQVVMGNKLLVYISCCLAGRAYPLGDIPEDLVPLVKNQVFEFLIRLHSTEGSVDEE
VYPYVRTLLHFDTREFLNVLALTFEDFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVG
CLFTFLARQLAKPNNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFE
ESRLIQMAEKAEFYQICEFMYERELRYDKIIGCYLRDPVRKEEVFNYIHNILSMPGYSAE
EKHSVWQKALEHIEELLLLSPCKAADLVAIHFSEQIESIITNLQDQFLLFQFLRSLLDPR
EGINQDLIHLPPCITEQFIELLCQYSPDQVLETLKVLEYCRLEETIQITQKHQLHEASSY
LLEKKGDIHGAFLVMLERLQSKLLMLTQDDESSAEQPLLENIEDTLMKTIGLCQRNSHNL
DQQQREALWFPLLEAMMSPQKLSGSSQCRYSESLKSLTMQVLNNMAAFIALPSILQRILQ
DPVYGKGKLGEIQGLVLGMLDTFNYEQTLLETTTSLLNHDLHWSLCNLRASVTRGLTPKQ
DYCCICLQQYKRRQETADEIIVFSCGHLYHSLCLLSKECGTVTKGLMRWMCYKCNSSNKG
GKLIENFSELKKGSGASLAQASSESLLDPQQIQAFDQLCRLNRGTSRLALLTELSRGHGG
EKHGLLSVSHGDPATSSVFQNENFQLHLAPPPLAED
NT seq
4251 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcgccggagcagggcccctgccccgcggcggcggaggccgagccgtgcccg
gagccgcccgcgcaccggctgagcgtggcggagctcgaccgcgagctggactcccgcagc
gagctggtgcgtcgtgggcctcggcgcggccccctgctcgccgccggagcctccctcccc
cggatcgatgacaaagaatttgacattcctcaagttgatactcctccaacactggagagc
atcttaaatgagactgatgatgaagaagagtctttcgttttggaggatccctttctcttg
aacattgataacacggatacacattcctacgacacatcttctgtagcgagctctgacagt
ggggaccggacacacctgaaaaggaagaaaaagctccctgattctctctcgctccatgga
tcagttatacggctctcgcttctgaaaggaatttctgcccaaatagtatctgcagcagac
aaagtggatgctggcttgcccactgcaattgcagcatcaaatctgatagcagtggggact
tcccatgggttagcactgatatttgatcaaaaccaggctcttcggctgtgtctgggcagc
actgctgttggggcccagtatggggctatctctgctctcagtatcaacaatgactgttcg
aggctcctgtgtggctttgcgaaaggacagatcacaatgtgggatctggccagtgggaag
ctgctacgatcgataacagatgcccacccaccaggaacagccattttgcacatcaagttt
acagatgacccgacgcttgcaatttgcaatgacagcggaggctccgtatttgaactgtca
tttaagagggttatgggagtgagaacgtgtgaatctcgatgtctcttcagtggctcaaag
ggggaagtttgctgtattgaaccattacatgcaaaagttgagctgagagaccatcctatc
acccagtattcactgctggccatggcctccttaacaaagatactggttattggcctgaag
ccatctctgaaagtgtggatgacctttccttacggtcgtatggacccttctagtgtccct
cttctggcgtggcactttgtggccatacagaactctgtgaaccccatgcttgcattttgt
cgaggagatgtcgttcattttcttctggtaaagagagatgatactggtgcaatacatgtc
actaagcagaggcagcttcatctacactatgacctcatcaactttacttggataaactca
cggacagcagtgcttctggacagtgtggagaagctgcatgttatagatcgtcagacacag
gaggagctggagaccatagagatctcagaagtgcagctagtctacaacagcagccacttc
aaatcgctggctacaggaggcaacgtcagcgaagccctggcattggttggagagaaagct
tgttatcagtccatcagcagctgtggtggtcagatcttctaccttggaactaagtctgtt
cacgtcatgacattgagaagctggagggagagagttgaccaccttctgaaacaagagcgt
ctcactgatgccctggctctagcttggtctttttatgaaggtaaagcaaaggctgtagta
ggcttgtctggggacacaaacaagcggaaagcagtcattgcagacagaatggttgaaatc
cttctccattacgctgatcggactttgaagaaatgtcctgaccaaggcaaaatccaggtt
atggagcaacattttcaggatgtggtgcctgtcatagttgattactgtctcttactccag
cgcacggatctattatttaaccagatatatgataagatgagtgagaattctgtagctaaa
ggcatctttctggagtgcttggagccatatatcttaagcgataagctgatggggatcaca
gctcaagtgatgaaagacttgctgcttcacttccaagacaagaacaggttggaaaatttg
gaagcctgcattgtgcatatggatatcaccagcttagacatacagcaggtagttcttcta
tgctgggaaaaccgtctctatgatgccatgatctacgtctacaacagtgggatgaatgac
ttcattagtcctatggagaagctgttcaaagtcattgctcctccactgaatgctgggaag
tctctcacagatgagcaggtggtaatgggcaacaagctgcttgtatatataagctgctgc
ttggcaggccgtgcgtatccattgggcgatattcctgaagatctggtacctttggttaaa
aatcaggtctttgaatttctcatccggctgcattcaactgagggatctgtggatgaagag
gtctacccttatgttcgtaccttgctgcactttgacactcgggaattccttaatgttctt
gctctgacttttgaagactttaagaatgacaagcaagctgtggaatatcaacagagaatt
gtggacatacttctgaaagtcatggtagagaattctgacttcaccccgtcgcaggttggc
tgtctctttaccttccttgcccgtcagctcgccaagcccaacaacacattgtttgtgaac
aggacactttttgaccaggtccttgaatttctgtgcagtccggatgatgactcccgccat
tcggagaggcagcaggtcctcttagaattgctccaggcaggagggatagtgcagtttgaa
gagagtcgtcttatccaaatggcagaaaaagctgaattctatcagatttgcgagttcatg
tatgaacgagagcttcgctatgacaagataattggctgttacctgcgtgacccagtgaga
aaagaagaagttttcaactatattcacaacatcctgtccatgcctggctacagtgctgaa
gaaaagcattcggtgtggcagaaagctttggaacatatagaggagttgctgttgctgagc
ccgtgtaaagcagctgacttggtagccattcacttcagtgagcagattgagagcatcatt
acaaaccttcaggaccagttcttactctttcagtttctgaggagtctccttgatccaaga
gaaggcattaaccaagacctgatacacttaccaccctgcatcactgagcagttcattgag
ctgctgtgtcagtacagcccagaccaggttctggagacgctcaaagttctggaatactgc
agactggaagaaaccatccagataacccagaaacaccagctccatgaagcttcttcatat
ttactggagaagaagggagatatccatggtgcctttttggttatgcttgagcgattgcag
agcaagttgctgatgcttacacaagatgatgaaagctcagctgagcaacccttgctggaa
aatattgaagataccttaatgaaaacaattggcctttgccagagaaattcacacaattta
gaccagcaacagcgagaggccctctggtttcccctgctggaggctatgatgtccccacag
aaattatctggttcttcacagtgtcgatactccgaatctttgaagagtttgacaatgcaa
gtgctgaacaacatggctgcatttatcgctcttccttcaatcctgcagagaattctacag
gatccagtttatggaaaagggaagctcggagaaattcaaggacttgtcttgggaatgctg
gacactttcaactatgaacaaactcttttagagacaactacgagtcttttaaaccatgat
ctccactggtccctgtgtaacctaagagcttctgtcactagagggcttaccccaaagcaa
gattactgctgcatttgtctacaacagtacaaaagaaggcaagaaactgctgatgaaatc
attgttttcagctgtggccacttgtaccattcgctgtgtctgctgagtaaagagtgtggg
acggtaactaagggcctgatgaggtggatgtgctataaatgcaactcgagtaacaaggga
ggaaaactgatcgagaacttctcagagctaaaaaaaggaagtggagcatccttggcacag
gcaagttcagaatctctgttggatcctcagcaaattcaagcttttgaccaactctgccga
ctcaaccgaggaacctccagactggctctcctgacagaactctctcgtggccatggtggt
gaaaagcacgggctgctcagcgtttcccacggtgacccagccaccagcagcgtcttccag
aacgagaacttccagctccacctggctccccctccgctggctgaagactag
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