Strix uralensis (Ural owl): 141947736
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Entry
141947736 CDS
T11361
Symbol
PDZRN3
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
sura Strix uralensis (Ural owl)
Brite
KEGG Orthology (KO) [BR:
sura00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sura04121
]
141947736 (PDZRN3)
Enzymes [BR:
sura01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
141947736 (PDZRN3)
Ubiquitin system [BR:
sura04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
141947736 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
Sina_ZnF
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
Prok-RING_4
zf-TRAF
PDZ_Tricorn
zf-rbx1
U-box
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
141947736
NCBI-ProteinID:
XP_074735265
LinkDB
All DBs
Position
10:complement(9976329..10125421)
Genome browser
AA seq
1061 aa
AA seq
DB search
MGFELDRFNGDVDPDFKCNLCNKVLEDPLTTPCGHVFCAGCVLPWVVQQGSCPVNCQRIS
TKELNHVLPLKSLILKLDIKCDNHARGCEAVVPLQHLGEHAETCDFSPAKCRNRGCRQVL
NLRDVETHMRERCEARPAGLCEQGCGLMLTHGERRAGGHGCLRALRAHGAALQARAAALE
KALKKEALRAGKREQSLLSRLAAAQLELQVTALRYQKRFTQYSARLDALARHRAASPGKG
EETKALTLVLHRDAGSLGFNIIGGRPCVDNQDGSSSEGIFVSKIVDTGPAAKEGGLQIHD
RIIEVNGKDLSKATHEQAVEAFKTAKEPIVVQVLRRTPRTKVFTPPHDSQLVDVGTQTDI
TFEHIMALSKMGSPTPPVSVLDPYLLPEDHPSVHEYYDPNDYMGGIHQEMDRDELELEEV
DLHRVNSQDKLGLTVCYRTDDEDDMGIYVSEIDPNSIAAKDGRLREGDRIIQINGIEVQN
REEAVALLTSEESKNISLLVARPEIQLDEGWMDDDRNDFLDDLHMDMLEEQHHQAMQFTA
SMLQQKKHEEDGGTTDTATILSNQHEKDSGVGRTDDSTRNDESSEQENNVDDHTTSSNTL
GSQKKLTYSHDTLGSGDMQFSNESFISADCTDVDFLGIPIDECERFRELLELKCQVKSAN
PYSLYYHNSTLDMSKSDQESVDRELEMLNEELRNIELECLNIVRAHKMQQLKDQYREPWM
LHNSGFRNYNTSIDVRRHELSDITELPEKSDKDSSSAYNTGESCRSTPLTLEISPDNSLR
RTAEGINCQGNEGAVAYNVSQKNLFASSESHESSSGKCPASAKDPDLGKQLESKERKASD
GSKSPTHGQKPSGSYASPYHHSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQSQMSLVS
MCKDFNSSQSEPRMEWKVKVRSDGTRYITKRPVRDRLLRERAIKIKEERSGMTTDDDAIS
EMKMGRYWSKEERKQHLVKAKEQRRRREFMMQSRLDCLKEQQGAEEKKEMNIIELSHKKM
MKKRNKKIFDNWMTIQELLTHGTKSPDGTRVYNSFLSVTTV
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atggggttcgagctggatcgcttcaacggggacgtggatcccgacttcaaatgcaacctg
tgcaacaaagttttggaggacccgctgaccaccccctgcggccacgtcttctgcgccggc
tgcgtgctgccctgggtggtgcagcagggcagctgccccgtcaactgccagcgcatctcc
accaaggagctcaaccacgtcctgcccttgaaaagcctcatccttaagctggacatcaaa
tgcgacaaccacgcgcggggctgcgaggcggtggtaccgctgcaacacctgggcgagcac
gccgagacctgcgacttctcccccgccaagtgccgcaaccgcggctgccgccaggtcctc
aacctccgcgacgtggaaacgcacatgcgggagcgctgcgaggcgcggcccgccggcctc
tgcgagcagggctgcggtttgatgctcacccacggcgagcgccgagccggcggccacggc
tgcctccgcgccctccgcgcccacggcgccgcgctgcaagcgcgggcggccgcgctggag
aaggctctgaagaaggaggcgttgcgcgccgggaagcgggagcagtcgctgctgtcgcga
ctggcggcggcgcagctggagctgcaggtgacggcgctgcgctaccagaagcgtttcacg
caatacagcgcccgcctcgacgccctggcccgtcaccgcgccgcctcccccggcaagggt
gaagaaactaaagcactgactcttgtccttcatcgtgacgctggctctcttggatttaat
attattggtggccgaccatgcgtggacaatcaagatggttcatctagtgaaggaattttt
gtatcgaaaatagttgacacagggcctgctgctaaggaaggagggctacaaattcatgac
aggattattgaggtcaatgggaaggatttatctaaagcaacacacgagcaggcagtggaa
gcattcaaaacagccaaggagcccatcgtggtgcaggtcctgagaagaactccccgcacc
aaggtcttcacacctcctcatgactcgcagctggtagatgtgggcacgcagacagatatc
acttttgaacacatcatggctctaagcaagatgggctcacctactccacccgtctctgtg
ctagacccatacctcctacctgaagaccatccatcagtgcatgagtactatgacccaaat
gactacatgggaggaattcatcaagaaatggaccgagacgagttggaattagaggaagta
gatttacatagagtgaacagccaggacaagcttggccttactgtatgttacagaacagat
gatgaagacgacatgggtatttatgtgagtgagattgatccgaacagtattgctgcaaaa
gatggtcgactccgagaaggggatcgcattattcagatcaatggcatagaggtacagaac
cgagaagaagctgtggcacttctcaccagtgaagagagcaagaatatctccttacttgtg
gcaagaccagaaattcagctggatgaaggatggatggatgatgacagaaatgattttctg
gatgacttgcacatggacatgttagaggaacagcaccaccaggcaatgcaatttactgcc
agcatgcttcagcagaagaagcatgaggaggatggaggtaccacagatacagccactatt
ttgtctaaccagcacgagaaggacagtggcgtggggcgcacagacgacagcactcgcaac
gatgagagctctgagcaggaaaacaacgtggatgatcacaccacctcctccaacacttta
gggagtcagaagaagctgacgtacagtcatgacaccctaggaagtggcgatatgcagttc
agcaacgagtcgtttatctctgccgactgcacagacgtcgacttccttggcatccccata
gacgaatgcgagcgattccgggaactgctggaactgaagtgccaggtgaagtctgccaac
ccttacagtctgtattatcataacagcactctggatatgagcaaaagtgaccaagaaagc
gttgacagagagctggagatgttgaatgaggagctgcgcaatattgagctagagtgcctg
aatattgtgagagctcataaaatgcagcagctgaaagatcagtaccgggagccctggatg
ctacataacagtggattccgcaactataacacaagcatcgatgttcgcaggcacgagctc
tcagacattacagagctccccgagaagtctgacaaggatagctcgagtgcatataacaca
ggcgaaagctgccgaagcacaccactcacgctggagatttcccctgacaattcgctgcgc
agaactgcagaaggcattaactgtcaaggtaatgagggggcagtggcatataacgtctcc
caaaagaatttatttgctagctcagaaagtcatgaatccagctctggtaaatgccctgcc
tctgctaaagatcctgaccttggcaagcagctggaaagcaaggagagaaaagctagtgat
gggagcaaaagccctactcatggtcaaaaaccttctggatcctacgcctccccgtaccat
cactctccatataagcatgctcatatccctgcccacgcccagcactatcaaagctacatg
cagctgatccaacagaaatcagcggtggagtatgcacagagtcaaatgagtctggtgagt
atgtgcaaagactttaattcaagccagagtgaaccaaggatggagtggaaagtcaaggtc
agaagcgatgggacccgctacattacaaagaggccagtcagggacaggctgctgagagaa
cgtgctataaagattaaggaggagcgcagtggtatgactaccgatgatgatgccataagt
gaaatgaagatgggccgttactggagcaaggaagagcggaagcagcatttagtgaaagcg
aaggagcagaggaggcggcgtgagtttatgatgcagagcaggttagattgcttaaaggaa
cagcaaggtgcagaagaaaagaaagagatgaatatcattgaactgagccacaaaaaaatg
atgaagaagagaaataaaaaaatatttgacaattggatgacaatccaagaactgctaacc
catggaacaaagtcaccagatggcacacgggtgtacaattccttcctgtcagtgactact
gtataa
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integrated database retrieval system
