Strix uralensis (Ural owl): 141948946
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Entry
141948946 CDS
T11361
Symbol
CHD9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
sura Strix uralensis (Ural owl)
Brite
KEGG Orthology (KO) [BR:
sura00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sura03036
]
141948946 (CHD9)
Chromosome and associated proteins [BR:
sura03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
141948946 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_CHD1_Hrp3
Motif
Other DBs
NCBI-GeneID:
141948946
NCBI-ProteinID:
XP_074738122
LinkDB
All DBs
Position
12:complement(7121608..7218897)
Genome browser
AA seq
2892 aa
AA seq
DB search
MTDPMMDFFDDANLFSETLEGLSDDAFVQPGPVSLVDELNLGAEFEPLHIDSLNHVQDAQ
NQQKLSDFDQLNQYDSLKLHSVNQSFNSSADNVLSPHSQFNCSPVHPQNQSNGMFPDVAD
GSPMWGHQTATTVSNQNGSPFHQGHSQSMQQNKSFVAHHDFALFQANEPQHQCASLRSQQ
SRNNAGQDALSQPKDFMEVNVSTSLRVSVNHPPPVSNPSTSQQPLSVQQFSQTASASIHF
CGNQEGNFDGQSPTITPCSVNNSQQFSSPYSYSNNHISPTSLLQSTTALSTSQQTHSISD
FTGSDAFTSQTGTKQETTEHMLNPNTPLNSNSFQMLHSAHPQGNFSSSKLSPVNINFPAS
TGSASQISHFTDPIESNGFTSLDENLLHQVETHNEPFTGLDPDDLLQEDLLPQFDDSAFV
QDSTSHVLEHDLEHHITPQQVTQSSDLVRAQSQSQIHPWHSSVSNQHLQDRSRVTLQGQP
PSSKKTDGSGSYTKLQNTQVRAMSEKKQKKKADSESKQEKANRIISEAIAKAKERGERNI
PRVMSPENFPSVSTEGKEEKKGRKVKSKPKDKESKKPKTGSSSKIKEKTKIGKLIITLGK
KQKRKNESSDELSDAKQTPQRPLKDEDSQKRRSNRQVKRKKYAEEGEGKQSEEEAKVSVK
IKKNSAPLPAEQPLQLFVENPSEEDAAIVDKILSSRVIKKEISAGMTVETEEFFVKYKNY
SYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVEVDRVLEVSL
CEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDQAKIEEFEQLQASRPDSRRLDRPPPN
SWKKIEQSREYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEIL
LAGIRGPFLIIAPLSTITNWEREFRTWTDLNVVVYHGSMISRQMIQQYEMYFRDSQGRIV
RGTYRFQAIITTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVL
LTGTPLQNTVEELFSLLHFLEPLRFPAESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLK
EDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKC
CNHPYLIKGAEEKILGEFKETYSPSAPDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLI
FSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGL
GINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLK
LGLDKAVLQSMSGRENSVGGIQQLSKKEIEDLLRRGAYGAIMDEEDEGSKFCEEDIDQIL
QRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIDAISGRNSL
VIDTPRIRKQTRPFSATKDELAELSEVESEGDDKPKLRRPCDRSNGYGRTECFRVEKNLL
VYGWGRWREILSHGRFKRQLNEQDVEIICRALLAYCLVHYRGDEKIKSFIWDLITPTEDG
QTRELQNHLGLSAPVPRGRKGKKVKTQASTFDIHKAEWLRKYNPEHLLQDEGYKKHIKHH
CNKVLLRVRMLYYLKQEVIGNEFQKVFDGIDASEIDVWVPEPDHSEVPAEWWDADADKSL
LIGVFKHGYEKYNTIRADPALCFLERVGKPDEKAVAAEQRANDYIDGDVEDPEYKPAPAM
FKDDIEDDVSSPGDLVIADGDGQMMEGDKIYWPTQSALTTRLRRLITAYQRTSKNRQAQQ
IQPAFPIQTSMMQPPYEEAALNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFDPERGR
FDWTKFRAMARLHKKTDESLEKYLYAFMSMCRRVCRLPSKEELVDPNIFIQPITEERASR
TLYRIELLRKVREQALRHPQLFERLKLCQPNPDLPVWWECGTHDRDLLIGAAKHGVSRTD
YHILRDPELSFMSAQRNYNQNKVALSRTSTPLLHQYQMALSASPLTPQSRLSDAKVNAFE
DIKAKNENLKEDPQSSEEESMSTEETQTVMKSEPLSPKNGTPIQNTDHKPSVKTETDRRM
VAARTEPLTPNPASKKQRVSKRGSDSSSDSDSDSDRSSCSSRSSSSSSSSSSSCSHSRSG
SSSSSSSSCSSASSSSSSSSSSSSSSSSSSSEESDSDEEEAQKRAEGTPHIKAYDEESVA
SLSTTQDETQDSFQMNNGTPNSSYLLQGGYMLAASYWPKDRVMINRLDSICQTVLKGKWP
SARRSYDSNTVASFYTTKLLDSPGAAADYSEPSAPTPPLAGVKEEYDQSPQMSKVKKHVR
EKEFTVKINDEGGLKLTFQKQGLSQKRPFESEEGALGQQQYLARLRELQNASETSLVNFP
KSLPKSGTSSHLTASANGVIVDSQPVVKKRRGRRKNVEGVDVLFINRNKQPNHVNPGINS
CQVAAGINPALTYTQSQGMLDAESPVPVINLKDGTRLAGDDAPKRKDLERWLKEHPGYVE
DSGACIPRMQLHDGRPKQKRHRCRNPNKLDINSLTGEERVQLINRRNARKVGGAFAPPLK
DLCRFLKENPEYGVAPEWGEVVKQSGFLPEGMFDRILTGPVVREEVSRRGRRPKSEIAKA
TAAAAAATAASVSVNPLLANGLLPGVDLPSLQALQQNLQNLQSLQVTAGLMGMPAGLTAG
GEAKNMAAMFPMLLSGMAGLPNLLGMGGLLTKSTESISEEKKGSDSKEADTKKERTEDQN
TDTGGENSVSSSPSTSSAAAAANPLSLNPLLLSNILYPGMLLTPGLNLHIPALSQSNIFD
VQNSESNDTGSAKPTEEKEENSRVRDQEDKGGTEPSSHNENSTDEGSEKADASSGSDSTS
SSSEDSDSSDED
NT seq
8679 nt
NT seq
+upstream
nt +downstream
nt
atgactgatcctatgatggatttttttgatgatgccaatctttttagtgagaccttagaa
ggtttgtcagatgatgcctttgttcagcctggacctgtttcacttgttgatgaattgaat
ttgggtgcagaatttgaacctttgcacatagactcattgaaccatgtgcaagatgctcaa
aatcaacaaaagctaagtgactttgatcagctgaatcagtatgattcactgaaacttcac
tcagtaaatcagtcttttaatagctcagctgacaacgtcttatcaccacactctcaattc
aattgttcaccagttcatccgcaaaaccagtctaatgggatgtttccagatgtggctgat
ggtagtcctatgtggggacatcaaactgccacaactgtttcgaatcaaaatgggtcccct
tttcaccaaggacattctcagtctatgcagcaaaacaaaagctttgtagcacaccatgac
tttgccttatttcaggctaatgaaccgcagcatcagtgtgcctcgctacggtcgcaacaa
agcagaaacaacgcggggcaagatgctctgagtcagccaaaagacttcatggaagtgaac
gtatctacttctctcagagtcagtgttaaccacccacctccagtttctaatccatcgact
tcacagcagcctctgtctgttcaacagttttctcaaactgcaagtgcttcaatacatttt
tgtgggaatcaagaaggaaattttgatggacagtccccaactattactccatgttctgtc
aataatagccaacagttttcatctccttattcttactctaataaccacatttctcctacc
agccttcttcagtctacaacagctctttctactagccagcagacacactctatctctgac
ttcactggaagcgatgcctttacatctcaaacagggaccaagcaagaaacaactgagcac
atgttgaatcctaatacacctttgaattcaaatagttttcaaatgttgcattctgcgcat
cctcagggcaactttagtagttcaaaactctctcctgtgaatattaattttccagcttca
actggttctgcttctcagataagccatttcactgaccctattgaaagcaacggttttaca
tctttagatgagaacttacttcatcaagtcgagactcataatgaaccatttacaggactt
gacccggatgacctccttcaggaagaccttttgccacagtttgatgattctgcatttgtt
caggatagcacaagccatgttttagagcatgacttagaacaccatataaccccacagcaa
gtaacccagtcatctgatcttgttcgggcacagtctcaaagtcagatccatccttggcat
tcttcagtttctaatcagcatctgcaagacagaagtcgtgtaaccttacaaggacagcct
ccttcctccaagaagactgatggctcaggatcatatactaagttgcagaatacccaggtg
agggcaatgtctgaaaagaagcagaagaaaaaagcagattcggaaagtaaacaagagaag
gcaaatcgcataatatctgaagcgattgcaaaagcaaaagagagaggagagagaaacatt
ccacgagtaatgagtcctgaaaacttccccagtgtttcaactgaaggaaaagaggaaaag
aagggtagaaaagttaaatccaaaccaaaggataaggagagcaaaaaaccgaaaactggt
tcctcatccaaaattaaagagaaaacaaaaattggaaagctaatcatcacactgggtaag
aaacagaaaagaaaaaatgaatcttcagatgaattatctgatgctaagcagactccacag
cggccactgaaagatgaagactcacagaagagaagatcaaatcgtcaagtgaaaaggaaa
aaatatgctgaggaaggagaaggaaaacaatcggaagaagaagctaaagtttctgtgaaa
atcaaaaagaattctgcccctttacctgctgaacagcctttacaattgtttgtggaaaat
ccaagtgaagaagatgcagcaattgtagacaagatcttatcctccagggtaataaagaaa
gaaatatctgctgggatgacagtagaaacagaagagttttttgtaaaatacaagaactac
tcttatctccactgtgagtgggccacagaacaacagcttttaaaggataaaagaatccag
cagaaaataaaacgattcaaactaaggcaagcacaaagagctcacttttttgcagatatg
gaagaagaaccttttaatcctgactatgttgaagtagaccgggtattagaagtatctctt
tgtgaagataaggacactggtgagcctgttatttactatttagtaaaatggtgttcattg
ccatatgaagacagtacgtgggagctgaaagaagatgtagatcaagcaaaaatagaagaa
tttgaacaattgcaagcttccaggcctgactcaaggagattggaccgaccacctccaaac
tcctggaagaagatagaacaatccagggaatataaaaatggcaatcagctcagggaatat
caactggagggacttaactggctcctattcaactggtacaataggcgaaattgcatttta
gcagatgaaatgggtcttggcaaaaccattcagtcaattacattcctctatgaaatcctc
ctggctggaataagagggccttttctgatcatagctccgctttccactattacaaactgg
gaaagagaatttcgcacgtggactgaccttaatgttgtagtgtatcatggaagtatgatc
agcaggcagatgattcagcagtacgagatgtacttcagggactcccagggacgtattgtt
cgaggtacctacagattccaagccattatcacaacttttgaaatgattcttggtgggtgt
ccagagttaaatgcaattgaatggcgatgcgttattattgatgaagctcacagactgaag
aacaaaaattgcaaactcttggaaggactaaaattaatgaaccttgagcataaagtgctg
ttaacgggtaccccactgcagaacacagtagaagaattatttagcctccttcatttcctt
gaaccattacgttttcctgctgaatccacattcatgcaagaatttggagaccttaaaaca
gaggaacaggttcagaaactacaagcaatcctgaaacccatgatgctcagacggttaaag
gaagatgtagaaaaaaagctggctcctaaggaggaaactataattgaagtagaactaact
aatattcagaagaagtattatcgagcaattttggagaaaaattttgctttcttatccaaa
ggagcagggcaagcaaatgtacccaatctggttaacactatgatggaactcagaaagtgt
tgtaatcacccttatctcatcaaaggtgctgaagagaagatccttggagagtttaaagaa
acatatagcccaagtgctcctgacttccatctgcaagcaatgatccagtctgctggtaaa
ttggttcttattgataaacttcttccaaaaatgaaagcaggaggccacaaggtccttatc
ttctctcagatggtgcgctgccttgatattttggaggattaccttatacataaaagatac
ttatatgaacgaattgatgggcgagtacgagggaatctcagacaagctgcaattgaccgg
ttcagcaaaccagattccgatcgctttgtcttccttctgtgcaccagagctggtggtttg
ggcattaacttgactgcagcagatacatgtataatttttgattctgactggaatcctcaa
aatgatctgcaggctcaagcccgttgtcacaggattggtcagaacaaagcagtgaaggtc
tacagactgataacacgtaactcgtatgaaagagagatgttcgacagagcaagcctgaaa
ctgggactggataaggctgtcttacagagtatgagtggaagggaaaacagtgttggtggt
atccaacaactctccaaaaaagaaatagaagacttgcttcgaagaggtgcatacggtgcc
attatggatgaagaagatgagggctctaaattctgtgaggaagacattgaccaaattttg
cagcgtcgtactaaaactatcacgattgaatcggaaggaaggggctccacatttgccaag
gctagttttgttgcatctggaaacaggactgatatttcattagatgatcccaacttctgg
cagaaatgggccaaaaaagcagaaatagatatagatgctatcagtggtagaaacagcctg
gttattgatacccccagaattaggaaacaaacacggccctttagtgctacgaaagatgag
ctggctgagttgtctgaagtggagagcgagggtgatgataaaccaaaactccgcaggcct
tgtgaccgttccaatggatatggaagaacagagtgttttcgggtggaaaaaaacttgctg
gtctatgggtggggtcgatggagggaaattttgtcacacggtcgcttcaagagacagctg
aatgaacaggatgtggagataatttgccgagctctattagcctattgtcttgttcactac
agaggggatgagaaaataaaaagttttatatgggatctcattaccccaacagaggatggg
caaacacgagagttacagaatcatcttggcttatcagcccctgtgcctagaggaagaaaa
ggaaagaaagtgaaaacccaggctagcacttttgatatacacaaagcagaatggcttcga
aaatacaatccagaacatctgttgcaagatgaaggatacaaaaagcacataaaacaccac
tgcaacaaggtcttgcttcgagtaagaatgctgtattacttaaaacaagaagtcattggt
aacgaattccaaaaggtgtttgatggaattgatgccagtgaaattgatgtttgggtccct
gagccagatcactctgaagttcctgcagagtggtgggatgcagatgcagataaatctctt
ctaattggagtttttaaacatggctatgaaaaatacaacactatcagagcagacccagcg
ctgtgcttcttggaaagggttggcaagccagatgaaaaagcagttgctgccgaacagaga
gcaaatgattatattgatggggatgtagaagatccagaatataaaccagcaccagcaatg
tttaaagatgacatagaggatgatgtttcatccccgggtgatctagtaatagcagatgga
gatggacaaatgatggaaggagacaaaatctattggcccactcagtctgccttaacaaca
cgtcttcgtcgtctgataacagcttatcagcgaacgagtaaaaataggcaggcccagcag
atccagccagcattcccaatacaaactagtatgatgcagcctccctatgaagaagctgct
ctaaatccaaagatggctgctaagattgaaagacagcaaagatggacaagaagagaagaa
gctgacttctacagagttgtgtccacatttggagtggtgtttgatcctgaaaggggacga
tttgattggaccaaatttagagcaatggctagactgcataagaaaactgatgagagctta
gagaagtacttgtatgcatttatgtcaatgtgccggagagtctgtcgtctcccctcaaaa
gaagaactcgtagatccaaacatttttatacaaccaattacagaggagcgtgcttcccgg
actttatatcgcattgaactcctaaggaaagtacgagaacaggctctcagacacccacag
ttgtttgaacgactaaaactatgccagccaaacccagacttacctgtctggtgggagtgt
gggactcatgacagggatttacttattggagctgctaaacatggagttagcaggacagat
tatcatattcttcgtgatcctgaactgtcatttatgtctgcccagaggaactataatcaa
aataaagtggcactctcaaggacttctactccactcttgcatcagtaccagatggcatta
tctgcttctcctcttacacctcagtcaagattgtcagatgctaaagtgaatgcttttgag
gacataaaagctaaaaatgaaaatctgaaagaggaccctcagtcttctgaagaggaatct
atgtctacagaggagacgcagacagtaatgaaatcggaacctttgagtccaaaaaatggc
acaccaatacaaaatacagaccacaaacctagcgtgaagactgaaacagacaggcgcatg
gtggcagcaaggacagagcctctaactccaaacccagcttccaaaaaacagagagtcagc
aaaaggggatctgactctagctctgactcagactctgactcagatagatcatcctgttct
tccaggtcgtcgtcttcatcctcttcgtcttcctcatcttgttcacactctcgatcaggc
tctagctcttcatcatcttcatcttgttcttcagcatcatcatcctcctcctcctcatcc
tcatcatcgtcgtcgtcgtcatcatcatcatctgaagagagtgatagcgatgaagaggag
gcacagaaacgtgcagaaggaaccccgcatataaaagcgtatgatgaagagagtgtggcc
tctctgagtacaacacaagatgagacgcaagacagtttccagatgaacaatgggacacca
aattccagttatctcctacaaggtggatacatgttggctgcatcctactggccaaaggat
cgagttatgattaatcgacttgacagtatttgtcaaacagtgttgaaaggtaaatggcct
tcagcaagaaggagctatgacagcaatacggtggcatctttctacacaaccaaacttctg
gatagcccaggtgcagctgcagattacagtgagcccagcgcaccaacaccccctcttgca
ggtgttaaggaagaatatgatcaatcaccacagatgtcaaaggtgaagaagcatgtacga
gaaaaggagtttacagtgaaaatcaatgacgaaggtggtttgaaattgacttttcagaag
cagggactgtctcagaaaaggccatttgaaagcgaggaaggtgcattgggacagcagcaa
tacctggctcggctacgtgaactccagaatgcttcagaaaccagccttgtcaacttccca
aaatcacttcccaaatcaggtacttccagtcacttaacagccagtgccaatggagtcata
gttgatagtcagcctgtagtcaaaaagagaagaggaagaaggaagaatgtggagggagtt
gatgtcctctttataaatagaaataaacagcctaatcatgttaatccaggtattaactcc
tgtcaagttgctgcaggaataaacccagcactcacttacacgcagtcccaaggcatgctt
gatgcagagagtccagttcctgttattaacctaaaagatggaacaaggcttgcaggtgat
gatgcccccaaaagaaaagatttagaaaggtggcttaaagaacatcctggatatgttgaa
gattcaggagcttgtattcctaggatgcagttgcatgatgggaggcccaaacaaaaacgg
caccgttgtcgaaaccctaataaactggacattaatagtttgactggtgaagaacgtgtt
cagctcataaatagaagaaatgcaagaaaggtagggggtgcatttgctccgcctctgaag
gatttgtgcaggttcttgaaagaaaatccagaatatggagtggctcctgaatggggagaa
gttgtgaaacagtctggatttcttccagaaggtatgtttgaccgtattctcactggacct
gttgtgcgggaagaagtaagtcggagaggaaggcgccccaaaagtgagattgcaaaggca
acagcagctgcggcagctgccaccgctgcaagcgtatcagttaaccctctgctcgctaat
ggattgcttccaggagtggatctgcctagtcttcaggccttacaacaaaacctgcaaaac
ctgcagtcgctgcaagtaacagcaggactaatgggaatgccagctggcttaactgctgga
ggagaagcgaagaacatggcggccatgttccccatgctgctgtcagggatggctggatta
cccaacttgctgggcatgggaggacttctaacaaagtctacagaatctatttcagaggaa
aaaaagggaagcgattcaaaggaggcagatacaaaaaaagaaaggacagaagaccaaaat
acggatactggtggtgaaaactctgtttcaagttctccttcaacatcctctgctgctgca
gctgccaatcctctctctcttaacccattacttctgtccaacatactttacccagggatg
cttctcactccaggccttaatcttcatatcccagctttgtctcagtctaatatttttgat
gtacagaacagtgaaagcaatgacacaggctcagccaagcccacagaagaaaaggaggaa
aattctcgggttagagatcaggaagacaaagggggaacagagccaagctctcacaatgaa
aacagcacagatgagggttcagagaaagcagatgcttcatctggatctgatagtacatcg
tcttcatctgaggattcagattctagtgatgaagactga
DBGET
integrated database retrieval system
