Strix uralensis (Ural owl): 141949280
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Entry
141949280 CDS
T11361
Symbol
COL4A5
Name
(RefSeq) collagen alpha-5(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
sura Strix uralensis (Ural owl)
Pathway
sura04382
Cornified envelope formation
sura04510
Focal adhesion
sura04512
ECM-receptor interaction
sura04518
Integrin signaling
sura04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sura00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
141949280 (COL4A5)
04518 Integrin signaling
141949280 (COL4A5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
141949280 (COL4A5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
141949280 (COL4A5)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
141949280 (COL4A5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sura04147
]
141949280 (COL4A5)
00536 Glycosaminoglycan binding proteins [BR:
sura00536
]
141949280 (COL4A5)
Exosome [BR:
sura04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
141949280 (COL4A5)
Glycosaminoglycan binding proteins [BR:
sura00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
141949280 (COL4A5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
141949280
NCBI-ProteinID:
XP_074738776
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Position
13:complement(16414781..16500229)
Genome browser
AA seq
1688 aa
AA seq
DB search
MEPRRWSRSLAAGCLVLLLGCWGPEEAAAAACHGCTSLSKCDCSGVKGEKGERGFPGLEG
QPGLPGFPGPEGPPGPRGSKGDDGLPGPIGPKGIRGPPGLPGFPGTPGLPGLPGQDGPPG
PQGIPGCNGTKGERGFPGSPGFPGLQGPPGPPGLPGMKGEAGEIITSSLPGQKGDPGFPG
LPGIPGPPGSMGIPGPIGPPGPPGLTGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGP
PGPPGQIGEQKRPNDIEFQKGDQGIPGDPGPPGLPGPQGPPGLPGGIKGEKGEQGEPGKR
GKPGKDGEPGQPGRDGLPGGPGINGAPGREGEKGEKGDIGPPGPPGIVISRPGIDATVGP
KGSKGLPGLPGAKGERGFSGRPGPPGLPGSPGITTVGPPGPPGLPGERGQKGDPGLPGVS
IPGQPGLDGPRGPPGPPGPPGPPAPSVPPGEGLCEQGPPGPPGIPGQQGFTGERGQKGDQ
GDTCFNCIGTGVTGPPGERGPPGPPGSPGSPGFPGPKGEKGLPGLTGLVGPPGFPGSPGA
PGRPGPKGDPGDVLTSPRMKGDKGDPGFPGPPGLPGIDGTPGRDGLPGLPGPKGEPGSVA
FKGEMGIPGDPGIPGLPGDKGLPGPPGFGPQGSPGEKGIQGVSGRPGPPGVPGPKGDPGQ
TITEPGVPGPPGPPGRNGDPGLPGDPGQPGQRGLSGIPGAKGEPGIPGIGLPGPPGPKGF
PGTPGPPGAPGAPGRPGLDGPPGPPGFPGQKGDRGFGVPGPPGPPGPPGTKGVQGPKGDP
GFPGNPGLPGRAGFDGTPGPKGDPGPSGPPGLPGPPGIPGIGGQGPPGSPGPPGPVGPPG
LQGIPGEKGDPGPPGFDVPGPPGDQGTPGYPGPPGLPGPQGSPGPPGRDGIPGFPGAKGE
MGVMGAPGPPGPPGTPGRNGLPGLKGNNGLPGPPGPPGLVGQKGIKGEAGLPGPPGKVDP
KQLGAKGEKGEPGVPGIPGLSGQKGYQGLPGDPGPPGLSGPPGVPGLPGIKGDTGLPGQP
GPTGPPGLKGAMGEMGLPGPPGIKGSQGIAGRPGQPGPAGFPGLKGDKGDPGLSSIGIPG
LPGPKGDLGLPGYPGSPGSKGIAGNPGLPGFPGSPGAKGEPGLPGFPGTPGIPGPKGIEG
PPGNPGLPGPPGPVGDIGRPGPPGPSGEKGQPGRDGIPGPAGQKGEPGLPGFGRPGPPGL
PGLSGQKGELGLPGPPGPPGLPGLKGEPGFQGFPGLQGPPGPPGLPGPPLEGPKGSPGPP
GVPGRPGPPGPEGPRGPPGNGGLKGERGNPGQPGPPGLTGQKGDQGPPGRQGDPGRPGLN
GMKGDPGLPGVPGFPGMKGPTGPAGPAGLTGSQGLPGPPGPPGLPGTIGRSIVVKGDPGP
PGPPGQPGSKGPPGLPGPQGLPGPIGLPGDPGRDGLPGFDGPVGRKGERGLPGQPGSRGI
QGPPGPDGLQGPPGPPGTASVAHGFLITRHSQTRDTPLCPQGTSRIYDGFSLLYVQGNER
AHGQDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMPMSMEPLTGQSI
QPFISRCVVCEAPAMVIAVHSQTIQIPSCPPGWDSLWIGYSFMMHTSAGAEGSGQALASP
GSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATVEVSEMFSKPQSETLKAGDLRTRISR
CQVCMKKT
NT seq
5067 nt
NT seq
+upstream
nt +downstream
nt
atggagccgcggcggtggagccgcagcctggctgccggctgcctggtgctgctgctgggg
tgctgggggccggaggaggcggcggcggcggcttgccatggatgtacatctttatccaaa
tgtgattgcagtggagtaaaaggtgaaaagggtgaaaggggattcccaggcttggaagga
cagccaggtttgcctggatttccaggaccggaaggaccacctggtccaagaggctcaaag
ggtgatgatggacttccagggcctattggacccaaaggaatcagaggaccgccagggctt
ccaggatttccaggaacaccaggacttcctgggttaccagggcaagatgggccaccagga
cctcagggtatcccaggatgcaatggaacaaagggagagcgtggattcccaggcagtcca
ggttttcctggtttacaagggcctcctggaccccctggtctgccaggtatgaagggtgaa
gcaggtgaaataattacatcctcgctgccaggacagaagggtgacccaggatttccaggt
cttccagggatacctggcccacctggctccatgggaataccaggtccaataggccctcca
gggcccccaggtttgacaggacctcctggtccaccagggctgccaggacctaagggtaat
atgggtttgaatttccaaggacccaaaggtgaaaaaggtgaacaaggtctacagggacct
ccagggccaccaggacaaattggagaacagaagagaccaaatgacattgagtttcagaaa
ggagatcagggtattccaggtgatccaggcccaccaggacttcctgggccacaaggccct
cctggtcttcccggtggcataaaaggtgaaaaaggtgagcaaggagaaccaggcaaaaga
ggaaagcctggcaaagatggagaacctggtcagcctggtagggatggcttacctggtggg
cctggaataaatggtgctccaggaagagagggtgaaaagggtgaaaaaggtgacattggt
ccccctggtcctcctggaattgtcatttcaagaccaggcattgatgcaacagtgggacca
aaaggtagcaaaggattgccaggacttccaggagccaaaggagagcgtggattctctggt
aggccaggcccacctggcttgccaggttctccagggatcactactgttggacctcctggc
ccacctggcttacctggtgagagaggacagaagggagatccaggtttacctggtgtttct
attcctgggcaaccaggacttgatggaccacgaggacctccaggaccaccaggtccccca
gggccacctgcaccatctgttcctcctggtgaagggttatgcgagcagggaccgccaggt
cctccaggaattccaggacaacaaggctttacgggggagcgaggccaaaaaggtgatcaa
ggagacacatgcttcaattgcataggaactggagtaactgggcctcctggggagagagga
ccaccaggacctccaggtagtccaggttctcctggttttcctggaccaaaaggtgaaaag
gggcttcctggattaactggccttgtagggccaccaggattcccagggtccccaggtgct
cctgggagacctggtcctaaaggagacccaggggatgtcctgacttctccaagaatgaaa
ggtgacaaaggagaccctggcttcccaggacctccaggtcttcctggcatagatggcact
cctggacgagatggactgccaggcctacctggccctaagggggagcctggcagtgttgca
ttcaaaggagaaatgggtattccaggtgatccaggaataccaggtcttcctggagacaaa
ggacttcctggacctcctggttttggtccacaaggttcacctggtgaaaagggcatccaa
ggtgtatcaggccgtccagggcctcctggagttcccggtccaaaaggtgaccctggccag
acaattacagaaccaggagttcctggcccccctggtcctccaggaagaaatggtgatcca
ggtcttccaggagatcctggtcagccaggacagcgtggcttatcaggcatcccaggtgca
aagggagagccaggtattcctggcattggacttccaggtccgccaggcccaaaaggtttc
ccagggactccaggcccccccggagctccgggagctccaggtcgccctggtctagatgga
cctcctggaccacctggtttcccaggacagaagggggatcgtggatttggagttccagga
ccacctggacccccaggaccaccaggcacaaaaggagttcaaggacctaaaggtgatcct
ggcttcccaggaaaccctggtctcccaggacgggcaggttttgatggcactccagggccc
aaaggtgaccctggaccaagtggaccaccaggactcccgggcccaccaggcatccctggc
attggtggtcaaggtccacctggatctccaggacctccgggtcctgttggccccccaggg
ttgcagggcattccaggggagaaaggggatccaggtcctccaggcttcgacgttcctggt
cctccaggtgaccaaggaaccccaggatatccaggaccccctggtctcccagggcctcag
ggttcacctggaccacctggccgggatggaatacctggatttccaggtgccaaaggtgag
atgggcgtcatgggagctcctggtcctccagggcctccaggaactcctggaagaaatggc
ctgcctggcttgaaaggtaataatggattacctgggccgccagggcctccgggactggta
ggacagaaaggcatcaaaggtgaagcaggcctgccaggtccgcctggaaaagttgatccg
aaacagctaggagcaaaaggagaaaaaggcgagccaggtgttccaggtattcctggttta
tcaggacagaaaggttaccaaggtctcccaggtgacccaggcccaccaggacttagtggc
ccaccaggtgtgccaggattgccaggcatcaagggagacacagggcttccagggcaacca
ggaccaacaggacctccagggttaaaaggtgccatgggagagatgggccttccaggtccc
ccaggcattaaaggcagccaaggaatagcaggacgtccagggcagcctgggcctgcagga
tttcctggattgaaaggagacaaaggtgaccctggtctttcaagcatcggtattcctggt
ctccctggaccaaagggtgatcttggtttgcctggatatccaggtagtccaggcagtaaa
ggtatagctggaaatcctggtttgcctggatttccaggcagtccaggtgcaaaaggagaa
ccaggccttcctggattcccaggaacgccaggaattccaggaccaaaaggtattgagggg
cctccaggtaatcctggcctgcctggaccacctgggccagtaggtgatattggtcgtcct
ggccctcctggtccttcaggggagaagggacagcctggtcgagatggtatccctggacca
gctggtcagaagggcgaaccaggtctaccaggttttgggcgcccaggacctccaggactc
ccaggattgtcagggcaaaaaggagaactggggttacctggcccaccggggccccctgga
cttccaggtctgaagggagaaccaggtttccagggatttcctggtctacagggtccacca
ggtccaccaggattaccagggccacctctggaaggtcctaaaggtagccctggcccacca
ggtgttccaggaaggccaggtccacctggcccagaaggtccacgagggccaccaggcaat
ggaggacttaaaggggaaagggggaacccgggtcaacctggcccacctggcctgactggt
caaaagggagatcaaggaccacctggacgccagggggatcctggtcgaccaggtctgaat
ggaatgaagggcgaccccgggcttccaggcgttccaggattcccaggtatgaagggtccc
accggacctgcaggacctgctggcctcacaggcagtcaaggactgccaggcccaccaggt
ccaccaggtttaccaggtaccattggacgaagcattgttgtcaaaggtgaccctggtccg
ccgggacctccgggacagcctgggtcgaaagggccacctggattgccagggccacagggc
ttgccaggtccaattggtcttcctggtgacccagggcgagatggactgcctggttttgat
ggtccagtaggacgtaaaggagagagaggtcttccaggccaaccaggttcacgaggaata
cagggacctcctggtcctgatggcttacaaggcccacccggtcctcctggaacagcttct
gttgctcacggattccttatcacccggcacagccagaccagggatacaccactatgtcca
caaggaacatcaagaatatatgatggattctctcttctatatgtgcaaggaaatgagaga
gcacatggccaggatttgggtactgctgggagctgtcttagacgtttcagcaccatgccc
ttcatgttctgcaacatcaacaacgtttgtaattttgcatcaaggaatgactattcctac
tggctatcaactccagagccaatgccgatgagcatggagccgctgactgggcagagcatc
cagccgttcattagccgatgtgttgtgtgtgaagctcctgctatggtgatagctgtccac
agtcagactattcagattccttcgtgtcctccaggctgggactccctttggattggttac
tctttcatgatgcacactagtgctggagcagagggctctggacaggccttggcatcgcct
ggatcctgtttagaagaattccgctcagctccattcattgaatgccatggtcgtggcact
tgtaattactatgccaattcatatagtttctggctggcaactgtagaggtgtcagaaatg
ttcagtaaacctcagtcagagacactgaaagctggagacttgaggacgcgtattagtcgt
tgtcaagtttgcatgaagaagacgtaa
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