Strix uralensis (Ural owl): 141952609
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Entry
141952609 CDS
T11361
Symbol
LIG3
Name
(RefSeq) DNA ligase 3
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
sura Strix uralensis (Ural owl)
Pathway
sura03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sura00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
141952609 (LIG3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sura03400
]
141952609 (LIG3)
Enzymes [BR:
sura01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
141952609 (LIG3)
DNA repair and recombination proteins [BR:
sura03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
141952609 (LIG3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
LIG3_BRCT
zf-PARP
DNA_ligase_A_C
BRCT_2
RNA_ligase
FMP23
mRNA_cap_enzyme
aRib
Motif
Other DBs
NCBI-GeneID:
141952609
NCBI-ProteinID:
XP_074746369
LinkDB
All DBs
Position
20:complement(6822833..6839815)
Genome browser
AA seq
995 aa
AA seq
DB search
MPTGCRTLSQAARALGRSTGLLCPHTQVSFPRPYLCCAGLPAASPSYWYQLLLRRISLQF
AGRNQGGGAGDFHFSLLLNLWHRQACTAAEDMAEQRYCVDYAKRGTAGCKKCKEKIVKGM
VRIGKIVPNPFTESGGDMKEWYHVKCVFEKLEKARATTKKIEDITDLEGWEELQDGEKEL
INKHISEANSKAANTPKKKVIVQAKLTATGQITTKDPLALTAPSPKKFSGFTAKPKNLED
VSANSSHKSSLSAKKCDPKHKDCLLREFRKLCAMVAEKPSYNVKTQIIQDFLKKGSGGDG
FHGDVYLTIKLLLPGVIKIVYNLNDKQIVKLFSRIFNCSQEEMVRDLEQGDVSETIRLFF
EQSKSCPPAAKSFLTIQEVDEFLIQLSKLTKEDDQQSVLQHITRRCTGNDLKCIIRLIKH
DLKMNAGAKHVLDALDPNAYEAFKASRNLQDVVERVLKNQLEAEKAPGLKRTLSVQASLM
TPVQPMLAEACKSIEYAMKKCPNGMYAEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHKV
AHFKDFIPQAFPGGQSMILDSEVLLIDNKTGKPLPFGTLGVHKKAAFQDANVCLFVFDCI
YFNDISLMDRPLCERRKFLHDNMVEIPNRILFSEMKHVTKASDLADMITRVIREGLEGLV
LKDTKGNYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIFLMGCYDP
KSEKWCTVTKCSGGHDDATLARLQTELDMVKISKDPSKIPRWLKINKIYYPDFIVPDPKK
APVWEITGAEFSKAEAHTADGISIRFPRCTRIRDDKDWKTATNLQQLKELYQLSKEKADF
SVVAGEEDESTAGSSGENEGNSRSSTPHSTIKTPPSKSPAKAQKPEESKAVIGSPQKSEE
KRGEKRKASEMEDNGKKMLLDIFTGVKLYLSPSVKDFDKIRRYFIAYDGDLVPEFDTASA
THVIGDVIDDNPGAKRVSPNWIWECIRKRRLVAPC
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgcccacaggctgcaggacactatcacaggctgcccgggcactcggcaggagcacagga
cttttgtgcccccatacacaggtctccttcccaagaccctacctttgttgtgctggcctc
cccgcggccagccccagttactggtaccagctgctgttacggcgtatatctctccagttt
gcgggcagaaaccagggtggtggtgctggggatttccatttctccctgcttttgaacctt
tggcatcgccaagcctgcacagctgcagaggacatggcagagcagaggtactgtgtagat
tacgccaagcgtggcacggcaggctgcaagaagtgcaaggagaagatcgtgaagggaatg
gtgcgcattggaaaaattgttcccaatcctttcacggagtctggcggggacatgaaggag
tggtaccatgtgaagtgcgtgtttgagaagctggagaaggcccgggccaccaccaagaaa
atcgaagacatcacggacttggaaggatgggaagagctacaagatggggagaaagaatta
atcaataaacacatctcagaagctaattccaaggctgcaaatacaccgaagaaaaaagtt
atagtccaagctaagctcactgctacaggacaaataactacaaaagatccattagctctc
accgctccatcaccaaagaagttctctggcttcacagccaagccaaagaacttggaagat
gtctctgcaaactcttcccacaagtccagcctatctgcaaaaaaatgtgatccgaagcac
aaagactgcttgctgcgggagttcaggaagctctgtgccatggttgctgaaaagcctagc
tataatgtgaaaacacagatcatccaggatttcctgaagaagggatctggaggagatggt
tttcatggtgatgtatacctgactattaagctgctgttaccaggcgtcattaaaattgtt
tacaacttgaatgataagcagattgtaaagctgtttagtaggatttttaactgcagccaa
gaagaaatggtccgggacctggaacagggagatgtttcagagaccatacgcctcttcttt
gaacagagcaagtcttgtcctccagcagccaaaagcttcctgaccatccaagaggtagat
gagttcctaatccagctatcaaagcttactaaggaagatgaccagcaaagtgtgctgcaa
catatcactcgcaggtgtacgggcaacgacctgaaatgcatcatcaggctaattaagcat
gacttgaaaatgaatgccggagcaaagcatgtgttggatgctttggatcccaatgcttat
gaggcgttcaaagcgtcccgcaacctccaggacgtggtggagcgagtgctgaagaaccag
ctggaggctgagaaggcgcccgggctgaagcgcaccctcagcgtgcaggcctctctgatg
accccggtccagcccatgctggctgaagcctgcaagtcaattgagtatgccatgaagaag
tgcccaaacggcatgtatgcagagatcaaatatgatggcgagcgggtgcaggtccataaa
aatggagatcatttcagctacttcagcagaagcctcaaacctgtccttccacataaagtg
gcccattttaaggacttcatcccccaggctttccctggtgggcaaagtatgatcctggat
tcagaagttcttctgattgacaacaaaactggcaagccacttccttttgggactcttggt
gtccataagaaagccgctttccaagacgccaacgtttgcttgtttgtgtttgattgcatc
tatttcaatgacatcagcctgatggacaggcctctctgtgaacgccgtaagtttctccac
gacaacatggttgaaatccccaaccggatcctcttctcggagatgaagcatgtcacgaaa
gcttcagatcttgcagatatgatcacccgagtcatccgtgagggactggaaggactggtg
ttgaaagatacaaagggtaattatgaaccaggaaaaaggcactggctgaaagtgaaaaag
gactacctgaatgagggtgcaatggctgacacggcagacctggtggtgctgggagctttc
tatggacaaggcagtaaaggtgggatgatgtccatcttcctcatgggctgctacgatccc
aagagcgagaagtggtgcactgtgaccaagtgctctggtggccacgatgacgccaccttg
gcgcgtctgcaaacggagctggatatggtgaagatcagcaaggatcctagtaaaattcca
aggtggctaaaaattaacaaaatctattacccagacttcattgtccccgatccaaagaaa
gctccagtgtgggagatcacaggggctgaattctctaaagctgaagcccacactgcagat
gggatctccattcgcttccctcgctgcacccgcattcgagatgacaaagactggaagaca
gccaccaacctccagcagcttaaggagctgtaccaactctccaaagagaaggctgatttc
agtgtcgttgctggggaggaagatgagtccacagctggcagcagtggagagaacgaggga
aattccaggtcttccaccccacacagcactattaaaactcccccaagcaagtcacctgca
aaagcccagaagccagaagagagcaaagcagtcattggatcccctcaaaaatcagaggag
aaacgaggggagaagcgaaaagcctctgagatggaagacaatggaaaaaagatgctgctg
gacatattcactggtgtgaagctgtacctgtcgccctctgtgaaggactttgacaaaatc
cggcggtactttatagcatacgatggggatcttgtgccagagtttgacacagcctcagca
acgcacgtcataggggacgttattgatgacaatcctggtgctaagcgtgtgtctcccaac
tggatctgggaatgcatccggaaacggagactggtagccccgtgctag
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