Sporosarcina ureae: SporoP32a_00045
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Entry
SporoP32a_00045 CDS
T04877
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
sure
Sporosarcina ureae
Brite
KEGG Orthology (KO) [BR:
sure00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sure03019
]
SporoP32a_00045
03009 Ribosome biogenesis [BR:
sure03009
]
SporoP32a_00045
Enzymes [BR:
sure01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SporoP32a_00045
Messenger RNA biogenesis [BR:
sure03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SporoP32a_00045
Ribosome biogenesis [BR:
sure03009
]
Prokaryotic type
rRNA helicases
SporoP32a_00045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Flavi_DEAD
AAA_19
DUF7117
Motif
Other DBs
NCBI-ProteinID:
ARK20077
LinkDB
All DBs
Position
7174..8469
Genome browser
AA seq
431 aa
AA seq
DB search
MSKFTDYQFKPFLREAIQKLGFEEPTPIQKEIIPLIMKNTSAIGQAHTGTGKSHSFLIPL
VEKIKPEKDELQTVITAPTRELAVQLHNELKKLIEGTDIKSAILIGGTDKKRSAERLKST
PHIIVGTPGRIQDMSETGALPIHTATHLVIDEADLAFDMGFIEDIDKFASRMPEKISMYV
FSATIPEKLKPFLSKYMNSPVHVRMDDKKPLTENMHYSLVPVRSMDKNKKLLHVMDALQP
YLAIIFTNTKQNADRLANYLAEHGHKPGKIHGDLTPRERTRVMKQVRDLEYQYIVATDLA
ARGIDIPGVSHVINFELPDDLEFFIHRVGRTARAGMQGHAITLYEPSDEDAINLIEKLGI
PFVHEDVKNGEWIEVKERQARKKRVREIDEIDKKADSFVRKPDKVKPGYKKKMAEQKENF
KKRQRRIKKKS
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaatttactgattaccaattcaaaccatttttgagggaagccattcaaaaatta
gggtttgaagaaccgacacctatacaaaaagaaattattccgttgattatgaaaaacacg
agtgcaattggacaagcacatacaggaacagggaaatcccatagtttcttaattccactt
gttgaaaaaatcaagccggagaaagacgaactacaaacggttattacagcaccaacacgt
gaattagctgttcagcttcataatgaactgaaaaagctaattgaaggaacggatatcaaa
agtgcgatcttgattggcggtactgataaaaaacgctctgctgaacgtttgaagagcaca
ccgcacatcatcgttggtacaccaggacgtatccaggatatgtcggaaaccggcgcatta
ccgatccacacagctacacatcttgtcattgatgaagcggatcttgcatttgatatgggc
ttcattgaagatattgataagtttgcttcaagaatgccagagaagatcagcatgtatgta
ttttctgctacgattccagaaaagctcaagcctttcttgtcaaaatacatgaattcacct
gtacatgtacggatggatgataagaagcctttgacagagaatatgcattactcattagtt
cctgttagaagtatggataaaaacaagaaactacttcatgtaatggatgcccttcagccg
tatcttgcgatcatcttcacgaatacgaagcaaaacgctgatcgtctggctaactattta
gcagagcacggccataagcctggaaaaatccacggtgacttgacgccacgtgaacgtaca
cgcgttatgaagcaagtccgtgatctagagtatcaatacatcgtggcaactgatttggcg
gcaagagggatcgatattccgggtgtcagtcatgttattaactttgaattaccagatgat
ctggagttcttcattcaccgcgtaggacgtactgcacgtgctggcatgcaaggacatgcc
attacgttatatgaaccgtctgatgaagatgcaatcaatttaattgagaagctcggtatt
ccgtttgtacatgaagatgtcaaaaatggcgaatggattgaagtgaaagagcgccaagca
cgtaagaagcgtgtacgtgaaatagacgaaatcgataaaaaagcggattcgtttgtccgt
aaacctgataaagtgaagccaggctataaaaagaagatggcggaacaaaaagagaacttt
aaaaagagacaaaggagaattaagaagaaatcatga
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