Sporosarcina ureae: SporoP32a_01945
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Entry
SporoP32a_01945 CDS
T04877
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
sure
Sporosarcina ureae
Pathway
sure03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sure00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SporoP32a_01945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sure03400
]
SporoP32a_01945
Enzymes [BR:
sure01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SporoP32a_01945
DNA repair and recombination proteins [BR:
sure03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SporoP32a_01945
RecFOR pathway proteins
SporoP32a_01945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_16
AAA_25
NB-ARC
nSTAND3
AAA_22
TsaE
AAA_14
Bac_DnaA
AAA_24
AAA_3
IstB_IS21
AAA_18
Sigma54_activ_2
DUF815
MCM
RNA_helicase
Rad17
NACHT
NTPase_1
NPHP3_N
Parvo_NS1
AAA_33
Motif
Other DBs
NCBI-ProteinID:
ARK20413
LinkDB
All DBs
Position
complement(384899..385897)
Genome browser
AA seq
332 aa
AA seq
DB search
MDERILTNEATDFDDSFEQSLRPQLLQQYIGQQQAKDNLSIFIEAAKKREESLDHVLLYG
PPGLGKTTLATVIGNEMGVNVRMTSGPAIERPGDLAAVVSSLEPGDVLFIDEIHRLNRAI
EEVLYPAMEDFCLDIMVGKGPTARSVRLDLPPFTLIGATTRAGALSAPLRDRFGVPLRLE
YYEVESLTEIVIRSANLFEVDIDPLAAVELAKRSRGTPRIANRLLRRVRDYAQVRGNGII
TLSIAQEALDMLQVDHHGLDQIDHQLLHSMIERFRGGPVGIDTLAASIGEESVTIEDVYE
PYLLQMGFIQRTSRGRMATEKAYEHFGYPLPE
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggatgaacgcatactgacgaatgaagcgacggattttgatgatagttttgaacagtca
ttacgcccgcaattattacaacaatatattggtcagcaacaggcgaaagataatttatcg
atctttatcgaggcggcaaagaagcgggaagaaagtttggatcatgtcttgctgtatggt
cctcctgggcttggaaaaacgacgctcgcgacggtaataggcaatgaaatgggtgttaat
gtccgcatgacgagcggtccggctattgaacgtccgggtgacttggcggcagtagtgtct
tcgttggagccgggcgacgtcttattcatcgatgaaatccaccggctaaaccgcgcgatt
gaagaagtgctgtatcccgcaatggaagatttttgtctcgatattatggtcggaaaaggt
ccgactgcgcgttctgtgcgactggatttgccgccgtttacattgattggtgcgacgaca
cgtgcaggggcattgtctgcaccgctccgtgaccgttttggtgtaccgcttagactagag
tattatgaagtggaatcattgacggagatagtcattcgaagcgcgaatttatttgaagtg
gacattgatccgttagcggctgtagaactggcgaaacgctcgcgtggaacgccacgtatt
gcaaatcgtctattgcgtagagttcgcgattatgcacaagtgcgcggaaacgggatcatt
acactttcgattgcacaagaagcactcgatatgctacaagtggatcatcatggactcgac
caaatcgaccatcagttgctccacagcatgatcgaacggttccgtggcggtccagtcggc
attgatacgctcgctgcaagtattggcgaagaatcggtgacgattgaagatgtctatgag
ccgtatttattacaaatgggatttattcaacgtacatcaagaggtcggatggcgacagaa
aaggcttacgagcatttcggttatccgcttcctgagtga
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