Sporosarcina ureae: SporoP32a_02630
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Entry
SporoP32a_02630 CDS
T04877
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sure
Sporosarcina ureae
Pathway
sure03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sure00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SporoP32a_02630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sure03019
]
SporoP32a_02630
03400 DNA repair and recombination proteins [BR:
sure03400
]
SporoP32a_02630
Enzymes [BR:
sure01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SporoP32a_02630
Messenger RNA biogenesis [BR:
sure03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SporoP32a_02630
DNA repair and recombination proteins [BR:
sure03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SporoP32a_02630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
HHH
Motif
Other DBs
NCBI-ProteinID:
ARK23043
LinkDB
All DBs
Position
complement(516733..518505)
Genome browser
AA seq
590 aa
AA seq
DB search
MIQNPLDILDKYFGYSAFREGQQRVIDQVLQGDDSLCVMPTGGGKSVCYQVPALAMEGTV
LVISPLISLMKDQVDALHQLGIPAAYINSTLSTEEYFGTMDNALEGKYKLLYVAPERLDS
ESFLNQLQKMTIPLIAIDEAHCISQWGHDFRPSYRNIHRIFDYLNNRPIVLALTATATPE
VQDDICQQLHIPPVSRVVTGFERSNLVFSVVKGQNRDQFVKEYVLKNKNESGIIYAATRK
AVEQVYLLLEKSGIPAAKYHAGLSIDERQQQQDRFIMEDARVMVATNAFGMGIDKSNIRY
VIHYQMPKNMESYYQEAGRAGRDGLDSDCYLLFSSQDVLTQRFLIEQSPDPSRVSNEIKK
MQVMVDYCHTEGCLQKHIIKYFGEDDVEDCGRCGNCTDTREQFDVTVDTQKVLSCVIRMG
QRFGKTMVAQVLTGSRNKKLKELNFDELSTYGLMKGRNAKDVADFIEFLISKNYLQVESG
PYPTIFVSEDGKDVLLGKVKVWRKGEMVTTVVAKDDPLFNELRAMRLKLAQEAGVPPFVI
FSDKTLRDMVAKMPATNEELLTVQGVGETKLERYGEVFLEIIDSFSTQQA
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atcattcaaaatccgttagatatattggacaagtattttggctattcagcatttcgtgag
ggacaacaacgagtcatcgatcaagtattgcaaggtgatgattcactctgcgtcatgccc
acaggtggcggtaagtctgtttgttatcaagtacctgcgctagcgatggaaggaacggtt
cttgtcatctcgccgcttatttccttgatgaaagaccaagtcgatgcattgcatcagtta
ggtattcctgcagcgtatattaatagtacgctatcgacagaagaatattttggtacaatg
gacaacgcacttgaaggaaaatataaactgttatatgtcgctccagagcgattggattcc
gaatcctttctcaaccaattgcaaaaaatgacgattccactgatcgcgatcgacgaagcg
cattgtatttcacaatggggacatgatttccgaccgagttatcgaaatatccatcgtatc
tttgattatttaaacaaccggcccattgttcttgcactaaccgcaacagctacaccggaa
gttcaggatgatatatgccagcaattgcatatcccgcctgtaagtcgtgtcgtaacaggt
ttcgaaagaagcaatttggtgttctctgtagtcaaaggtcaaaatcgagatcaattcgtt
aaagaatatgttctaaaaaacaaaaatgaatcgggcattatttatgctgctactagaaaa
gcagtggagcaagtttatttattacttgaaaaaagtggtattccagctgcaaagtatcat
gcaggattatcaattgatgaacgccaacagcaacaagaccgattcatcatggaagatgca
cgcgtgatggtcgcaactaacgcgttcggtatgggaatcgataaatccaatattcgctac
gtcattcattatcaaatgccgaagaatatggaaagttattatcaggaagctggaagagca
gggcgtgacgggcttgacagtgattgttatttgttattctcttcgcaagacgtcttaaca
caacgcttcctcatcgaacagtctccagatccttcccgtgtatcgaatgaaatcaaaaag
atgcaagtgatggtagattactgccatacagaaggctgtctgcaaaaacatatcatcaag
tattttggcgaagatgacgttgaagattgtggtcgttgcggtaactgcaccgacacgcgc
gagcagtttgatgtaactgttgatacgcaaaaagtgctttcctgtgttattcgcatgggg
caacgcttcggtaagacgatggttgcgcaagtactgacaggatcgagaaataagaagctc
aaagaattgaactttgatgagctatcgacatatggattgatgaaagggcgcaatgccaaa
gacgtggcagattttatcgaatttttgatttcgaagaattatctacaagttgaaagtggg
ccgtatcctactattttcgtcagtgaagatggcaaagacgtcttattagggaaagtaaaa
gtctggcgtaaaggcgagatggtgacaactgtcgtcgctaaagacgatccgttattcaac
gaactgcgagcgatgcgtttgaaactggcacaagaagctggtgtcccaccattcgttatt
ttctcggacaagacattacgggatatggttgccaaaatgcctgccactaatgaagagtta
ttaactgtgcaaggggtaggcgaaacgaagcttgaacgttacggggaagtgttccttgag
attatcgattcgttttcaacacagcaagcgtaa
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