Sporosarcina ureae: SporoP32a_05360
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Entry
SporoP32a_05360 CDS
T04877
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
sure
Sporosarcina ureae
Pathway
sure03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sure00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SporoP32a_05360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sure03400
]
SporoP32a_05360
DNA repair and recombination proteins [BR:
sure03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SporoP32a_05360
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SporoP32a_05360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
RsgA_GTPase
AAA_16
AAA_21
AAA_29
nSTAND1
AAA_22
nSTAND3
AAA_25
AAA_33
AAA_14
AAA_18
NACHT
DnaJ_CXXCXGXG
ATPase
NB-ARC
MeaB
cobW
AAA_24
Viral_helicase1
MMR_HSR1
PRK
Septin
DUF87
NTPase_1
DUF2853
Dynamin_N
DUF463
Motif
Other DBs
NCBI-ProteinID:
ARK21013
LinkDB
All DBs
Position
complement(1070523..1073390)
Genome browser
AA seq
955 aa
AA seq
DB search
MKNKELIIQGARANNLKDITVKIPRDKLVVLTGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLGQMDKPDVDSIEGLSPAISIDQKTTSKNPRSTVGTVTEIYDYLRLLYARVGKP
HCPYHGIEISTQTIQQMVDRVIELPERTRIQILAPIISERKGTHAKLFEDIKKQGYVRVR
VNGETIDLDDNIDLDKNKKHTIEIVIDRIVMKEGVETRLSDSLESALRLADGNVLVDVIG
EEELFFSEHHACPICGFSIGELEPRMFSFNSPFGACPECDGLGMKLEVDPDLVIPNSELT
LKEHAIAPWEPTSSQYYPELLKTIAKHYKIPMDVPVGELADSDIEKLMLGSKKEKIRFRY
TNEFGNTRDSDIYFEGVLRNVERRYHETSSDYIREQMGKYMTEKSCPTCTGYRLKPESLS
VLVDGQHIGKITERSIVETTKFFDQLTLSEKDTQIADMILKEIQERLGFLVNVGLDYLNL
SRSAGTLSGGEAQRIRLATQIGSRLTGVLYILDEPSIGLHQRDNDRLIGTLQSMRDIGNT
LIVVEHDEDTMMAADYLIDIGPGAGVAGGEVIAAGTPAKVMKNKKSLTGQYLSGKKFIPL
PIERRSRDERSIIVKGAAENNLKHIDAEFPLGQFIAVTGVSGSGKSTLVNDILHKTLAQK
LNRSKQKPGKFDSISGVEHLEKIIDIDQSPIGRTPRSNPATYTGVFDDIRDVFAMTNEAK
VRGYKKGRFSFNVKGGRCEACRGDGIIKIEMHFLPDVYVPCEVCHGKRYNRETLEVNYKG
KNIADVLAMTVEYAVVFFENIPKINRKLQTIVDVGLGYVQLGQPATTLSGGEAQRVKLAS
ELHKRSMGKSFYILDEPTTGLHVHDIAKLLEVLQRLVDGGNTVLVIEHNLDVIKTVDYII
DIGPEGGDKGGEIVATGTPEEIADVKESYTGKYLKTILDRDRNRMKEQIKQVVKK
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaataaagaacttataatacaaggagcgcgagcgaataacctaaaagatataacg
gtgaagattccgcgtgataaattggtcgtgctcacgggcctatcaggttcaggaaagtct
tcactggctttcgatacaatctacgcggaaggacagcgccgctatgtagaatcattatcc
gcatatgctcgtcagttccttggacaaatggacaagccggatgtggattctattgaagga
ttgtcaccggcaatttccatagaccaaaagacaacgagcaaaaatccgcgttcgactgta
ggaaccgttacggaaatctatgactacttgcggttgttatacgcaagggttgggaaaccg
cattgtccatatcatggcattgaaatctctacgcagacgattcagcagatggtggatcgc
gtaatcgagttgcctgagcgtactagaattcaaattttggcgcctattatttcagaacgt
aaaggaacgcacgctaaactattcgaagatataaagaaacaaggttatgtacgtgtccgc
gttaacggcgaaacgattgatcttgatgataatatagacttggataaaaataaaaaacat
acgattgaaatcgtcattgaccgaattgtcatgaaagaaggcgtcgaaacacgacttagt
gattcattggaatctgcattacgcctagctgacggcaatgttcttgtcgatgtaatcggt
gaagaagaattgttctttagtgaacatcacgcatgtcctatttgcgggttttctatcggt
gaactagaaccgcgtatgttttcattcaacagtccgttcggtgcatgtcctgaatgtgat
gggcttggcatgaagcttgaagtcgaccctgatttagttattcctaatagtgagttgacg
ttaaaagaacacgccattgcaccatgggagccaacgagttctcagtattatccagagctg
ctcaagacgattgccaagcattataaaattccaatggatgtacctgttggtgagctagcc
gactcggatattgaaaagcttatgttgggatccaaaaaggaaaaaatacgtttccgctat
acgaatgaattcggaaatacacgcgacagcgacatctattttgaaggtgtattgcgcaac
gtagaacgtcgttatcatgagacatcatcagactatatacgtgagcaaatgggcaagtat
atgacggaaaaatcctgtccgacttgtacgggataccgcttaaaaccggaatcactttcg
gtgttagtggatggtcagcatattgggaagatcacggaacgttcaattgttgaaacgacg
aagttctttgaccaattaacactttccgaaaaagatacacagattgccgacatgattctg
aaagaaatccaggagcgtctaggcttcttagtgaacgtcggactcgattatctgaattta
tctcgttcagcgggtacattatctggtggagaagcacagcgaattcgtttggctacacaa
atcggatcccggttaacaggcgttctttatatacttgacgaaccttccatcggcctacat
cagcgagataatgatcgattaatcggcacgttgcaaagtatgcgcgatattgggaatacg
ctaatcgttgtagaacatgacgaagatacgatgatggctgcagactatttaattgatatt
ggtcctggcgctggagtcgcaggcggagaagtaatcgctgcgggtacacctgcgaaagtg
atgaaaaacaagaagtcgttgacgggtcaatatttaagtggaaagaaatttattccgctt
ccgattgaacgtagatcacgtgatgaacgcagtattatcgttaaaggggctgcagaaaat
aacttgaagcatattgatgcagagttcccgctcggtcaatttatcgcggtcactggcgtc
tcaggttcaggtaagagtacattggtcaatgatattttgcataagacgttggctcaaaaa
ttaaatcgatccaaacagaagcctggaaagttcgatagtatcagtggtgtggaacattta
gagaagatcattgatattgatcaatcaccaattggacgtacaccacgttcaaatccggct
acttatacaggagtctttgacgatattcgtgatgtgtttgcgatgacgaatgaagccaaa
gtacgcggctataaaaaaggtcgctttagtttcaacgtcaaaggtggacgatgtgaagcg
tgtcgtggagacggaatcatcaagatcgaaatgcatttccttcctgatgtgtatgtaccg
tgcgaagtgtgtcacggcaaacgttataaccgcgaaacacttgaagtgaattataaaggt
aagaatattgcagacgtactagcgatgacagtggaatatgcggtagtatttttcgaaaac
attccgaaaatcaatcgtaaattacaaacgattgttgatgtggggctaggctatgtacaa
ttaggccaaccggcaacgacattatcaggtggggaagcccaacgtgtaaaactcgcttcc
gaactccataaacgttccatgggcaaatcattctatattctagatgagccgacaacgggc
ttgcatgtacatgacatagccaaactacttgaagttcttcaacgtctagttgacggaggg
aatacggttctcgtcattgagcataatctggatgtcattaagacggttgattatataatc
gatatcggtccggaaggcggagacaaaggtggagaaattgttgcgacgggaacaccggaa
gaaatagctgatgtgaaagagtcttacacagggaaatatttgaagacgatcttagataga
gatcgaaatcgaatgaaggaacaaattaaacaagtagtaaaaaaatag
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