Sporosarcina ureae: SporoP32a_05415
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Entry
SporoP32a_05415 CDS
T04877
Name
(GenBank) 3'-5' exonuclease
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
sure
Sporosarcina ureae
Brite
KEGG Orthology (KO) [BR:
sure00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sure03019
]
SporoP32a_05415
Messenger RNA biogenesis [BR:
sure03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SporoP32a_05415
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
ARK21024
LinkDB
All DBs
Position
complement(1082542..1083480)
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AA seq
312 aa
AA seq
DB search
MKKLLDYQVGETIDMYLLIKQATKGVTQQGSPFMTLILQDKSGDLEAKLWDAGEEQAQMY
QGATIVKVGGEIHEYRGKNQLRLKAIRPAKEDEGVTIADLVPSAEKSKEVLLDELMQYFF
EMQNPQIQRVTRHLLKKHQQDFVLYPAATRNHHDYVSGLLDHVVSMLKLGKAIAELYPTL
NKDLLYAGIILHDIGKVIELSGPVGTQYTIEGNLLGHITIMVNEISKAAEELEIEGEEVM
LLQHMVLSHHGKEEWGSPKRPMLKEAEILHYIDNIDAKMNMLNRVMSKTTPGEFSERVFP
LDNRSFYKPTFE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaactacttgactatcaagtcggcgaaacaatcgacatgtatttattgattaag
caggcaacaaaaggtgtcacacagcaagggagtccgttcatgacgttgattctgcaagat
aaaagtggtgaccttgaagcgaaactttgggatgcgggtgaagaacaagctcagatgtat
cagggagcaaccatcgtaaaagtaggcggagaaattcatgagtaccgtggaaaaaatcaa
cttcgtttgaaagcaattcgtcctgcgaaagaagatgaaggggtaacaattgcggattta
gtaccttctgccgaaaagagcaaggaagtattgttagacgaattaatgcagtatttcttt
gaaatgcagaatccacaaatccagcgcgtgacacgtcatttattgaagaaacatcagcaa
gatttcgtattatatccagcggctacgagaaatcatcatgactacgtttcaggcttatta
gaccacgttgtttcgatgttgaaactcggtaaggcaattgcggaattgtatccaacattg
aacaaagatttactgtatgcaggaattattttgcatgatatcggtaaagttatcgagttg
tcaggcccggtcggtacgcagtatacgatcgaagggaatttgctagggcatattacgatc
atggtcaatgaaatttccaaggctgcagaagagttggagattgagggtgaggaagtgatg
ttgcttcagcatatggtgttgtctcaccatggtaaagaggagtggggcagtccgaagcgt
ccgatgttgaaggaggcggagattcttcattatattgataatatcgatgcgaagatgaat
atgctgaaccgcgtcatgtcgaaaactacgccaggcgagttctctgagcgcgtattccca
ctggataaccgttcgttctataagccaacttttgagtga
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