Sporosarcina ureae: SporoP32a_06380
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Entry
SporoP32a_06380 CDS
T04877
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sure
Sporosarcina ureae
Pathway
sure03420
Nucleotide excision repair
sure03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sure00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SporoP32a_06380
03430 Mismatch repair
SporoP32a_06380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sure03400
]
SporoP32a_06380
Enzymes [BR:
sure01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SporoP32a_06380
DNA repair and recombination proteins [BR:
sure03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SporoP32a_06380
MMR (mismatch excision repair)
Other MMR factors
SporoP32a_06380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_22
AAA_11
NAD_binding_10
ResIII
Staph_reg_Sar_Rot
Motif
Other DBs
NCBI-ProteinID:
ARK21185
LinkDB
All DBs
Position
complement(1279680..1281914)
Genome browser
AA seq
744 aa
AA seq
DB search
MNKLSDDLLKGMNPEQARAVKTTEGPLLIMAGAGSGKTRVLTHRIAYLVVEKQVYPSNIL
AITFTNKAAREMRDRIDGLLGAGSGERMWVSTFHSMCVRILRKYVDRIGLSKNFTILDSA
DQMTAMKRVLKELNLDPKQNDPRAMLGIIGNAKNECIDAIEFRKNSDPQNPHERTLADIY
DRYTKKLRQNQSMDFDDLIMMTTVLFERVPEVLEYYQNKFQYIHVDEYQDTNNAQYRLVK
MLASKFRNVCVVGDSDQSIYRWRGADIGNILSFEKDYKEANVILLEQNYRSTKRILQAAN
EVIDNNKSRYDKKLRTDNPEGELISIYKARDEKDESQFVVQQIIELKEEMGLTLDQFAIL
YRTNAQSRLIEEYLLKSNLDYTIVGGTKFYDRKEIKDLLAYLRLIANNDDDLALARIINE
PKRSIGATSFERMATFSLQNDRSIFDSLQEVDFMGLPKKALTETVKFHEMINGFTQMQEF
LSVTELVKEVIEKSGYREMLEKEKSIEAESRLENIEEFLSVTEAFEKRSAEEEEEPTLVA
FLTDLALVADIDTLDKEENTSTEKIVLMTMHAAKGLEYPVVFVLGMEENIFPHIRALADP
EEMEEERRLAYVAITRAEQRLYLTCAGHRMLFGKSNFNQPSRFLNEISEELTELLADGNG
MSVPFAQAPKARAKRPAVKRPAYNESGGEKMQWKPGDKASHKIWGIGTVVSVKGSADDME
LDIAFPNPVGIKRLLAKFAPIEKE
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgaataaactatcagatgatttactaaaaggcatgaatcctgagcaagcacgcgcagtc
aagacgacggaaggtccgttgcttattatggcgggggcgggttcaggaaagactcgtgta
ttgacacatcgaattgcgtatttggttgtggagaagcaagtgtatccttcgaatatatta
gctattacatttacaaataaagcagcacgtgaaatgcgtgatcggattgatggactgcta
ggcgcaggctctggagaacgtatgtgggtttcgacattccactcgatgtgtgttcggatt
ctacggaagtacgtagatcgtattgggttatccaaaaactttactattctcgacagtgcg
gaccaaatgaccgcgatgaaacgagtattgaaagaacttaatctagacccgaaacagaat
gatccacgggcgatgctcggaattattggaaacgcgaagaatgagtgtatagatgcaata
gagttccgtaaaaattcggatccacaaaacccacatgagcgtacattagcagatatttac
gatcgttatactaaaaagttacgccagaatcagtcaatggactttgatgatttgattatg
atgacaactgttttgtttgagcgtgttcctgaagtgctggagtattatcaaaataaattt
cagtatattcatgtggatgagtaccaagatacaaacaatgcgcagtatcgtctcgtcaag
atgcttgcatcaaaatttcgcaatgtctgcgtagtaggtgactcggatcagtcgatttat
cgttggcgtggtgcggacattggtaacatactgtcttttgaaaaagattataaagaagcg
aatgtcattcttttagagcaaaattaccgttccactaaaagaattttacaagccgccaat
gaagtaatcgacaataataaaagtcgctacgacaagaaattacgcacagataatcctgag
ggcgaattgatttcaatatacaaagcgcgcgatgagaaagatgagtcacaatttgttgtc
cagcaaatcattgagttaaaggaagaaatgggattaacacttgatcaatttgcaatactg
taccgaacgaatgcacagtctcgtctaattgaggaatacttattgaaatctaacctcgac
tatacaattgtcggtggtacaaagttctatgatcgaaaagaaattaaagatttgctggca
tatttacgtctgattgctaataacgatgatgatttggccttagcaagaatcattaatgaa
ccgaaacgaagcattggtgctacttcatttgaacgaatggcgacattctctcttcaaaat
gaccgttccatattcgattcattacaagaagttgatttcatgggcttgcctaaaaaagca
ttgacagaaaccgtgaaattccatgaaatgattaatggattcacgcaaatgcaagagttt
ttatctgttacggaattagtaaaagaggtcattgaaaagtccggctatcgcgagatgttg
gaaaaagagaaatcaatcgaagcagaaagccggcttgagaatattgaagaattcttatcc
gttacagaagcatttgaaaaacgttccgcggaagaagaggaagaaccgacactcgttgca
ttcttgacggacctggcgctagtagctgatatcgatacgttagataaagaagagaacact
tccactgaaaaaatcgtcctaatgacgatgcacgcagcaaaaggcttggaatatccagtg
gtctttgtattaggcatggaagaaaatatcttcccacatattcgagcactcgctgatcca
gaagaaatggaagaagaacgaagacttgcttacgtagcgataacgcgtgcagaacagcgc
ctttacctgacgtgtgcgggtcatagaatgctgttcggtaagtcgaacttcaatcagcca
tcccgtttccttaatgaaatttccgaagaactgacggagttgttggcagatggcaatggc
atgagtgtaccgttcgctcaagcacctaaagcaagagccaaacgtccagcagttaaacgc
ccagcttacaatgaaagcggcggggagaaaatgcagtggaaaccaggtgacaaggcgtcc
cataaaatatgggggatcggaactgtcgttagcgttaaaggtagcgcagatgacatggag
ttggatattgcattccctaatccagtaggtatcaagcgactattagctaaatttgcaccg
attgaaaaagaataa
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