Sporosarcina ureae: SporoP32a_09575
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Entry
SporoP32a_09575 CDS
T04877
Symbol
gyrB
Name
(GenBank) DNA topoisomerase IV subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
sure
Sporosarcina ureae
Brite
KEGG Orthology (KO) [BR:
sure00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sure03032
]
SporoP32a_09575 (gyrB)
03400 DNA repair and recombination proteins [BR:
sure03400
]
SporoP32a_09575 (gyrB)
Enzymes [BR:
sure01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SporoP32a_09575 (gyrB)
DNA replication proteins [BR:
sure03032
]
Prokaryotic type
DNA Topoisomerases
SporoP32a_09575 (gyrB)
DNA repair and recombination proteins [BR:
sure03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SporoP32a_09575 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ARK21764
LinkDB
All DBs
Position
1927889..1929817
Genome browser
AA seq
642 aa
AA seq
DB search
MAIEDKDIQTDYDAGQIQVLEGLEAVRKRPGMYIGTTSAKGLHHLVWEIVDNSIDEALAG
YCDHIEVTIEKDNWIRVADNGRGIPVGIQESTGRPAVEVIMTVLHAGGKFGGGGYKVSGG
LHGVGSSVVNALSEKTEVYVKRDNKLYAIEFSRGPVSKELEVIGESDETGTTIRFKADSE
IFTETTEYEYSILATRLRELAYLNRGLRITIADERGEETVSELFHYEGGIKSYVQHLNVN
KEPIFEDPIYTEGERDGITVEVAMQYNSGYGENLLSFANNIHTYEGGTHEQGFKTALTRV
INDYARKNGLLKESEDNLTGDDVREGLTAIVSIKHPDPQFEGQTKTKLGNSEVSTITNSL
FSEALQRFLIENPVVARQVVGKSTMAARARMAAKNARELTRRKSALEISSLPGKLSDCSS
RDPAISELYIVEGDSAGGSAKNGRDRHFQAILPLRGKILNVEKARLDRILGNAEIRMIIT
ALGTGIGPEFNLDKARYHKLVIMTDADVDGAHIRTLLLTFFFRFMRPLIEAGYVYIAQPP
LYRVRAGKKEEYCYDEEALQEILSRMPASPKPDITRYKGLGEMNPEQLWETTMDPEKRTF
LQVRMDDAIEANATFEELMGDEVEPRRKFIEDNAVFAQNIDT
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
ttggcaattgaagataaggacatacagaccgattatgatgcaggtcagatacaagtattg
gaaggccttgaagctgtccgcaaacgtcccggtatgtatattgggactacaagtgcaaaa
ggacttcatcatcttgtatgggaaattgtagataacagtattgacgaagccctcgctggg
tactgtgatcacatcgaagtaaccatagaaaaggataactggattcgtgtagctgataat
ggccgcgggattccagtaggcatacaagagtcaacaggcagacccgcagttgaggtcatc
atgactgtattacacgctggcggtaagtttggcggcggtggatataaagtttctggtggt
ctacacggcgtaggatcttcagttgtcaatgctttgtcagagaagacggaagtctatgtt
aagcgtgataataaactatacgcaattgagttttctagaggacccgtctcaaaagaactt
gaagtcattggagaatcggatgaaaccggtactacaattcgattcaaggcggattctgaa
atctttacggaaacaacggaatatgagtacagcatattggcaacacgtttacgtgaactt
gcctatctaaatcgtggcttacgcattaccattgcggatgagcgcggtgaagaaacggta
tcagaactgtttcactacgaaggcggaatcaaatcatacgtccagcatttgaacgtaaat
aaagaaccgatctttgaagatccaatttataccgaaggcgaacgtgatgggattactgtt
gaagtggctatgcaatacaacagtggctacggagaaaacctattgtcatttgcgaataac
atccatacgtatgaaggcggtacacacgagcaaggcttcaaaactgcattgactcgagtg
attaacgactatgcacgtaaaaacggcttattgaaagagtcagaagataatctgacaggg
gatgatgtgcgtgaaggactaacggctatcgtatccattaagcaccctgatcctcaattc
gaaggtcaaacaaaaacgaaattaggtaactcagaagttagcacgattacgaattcacta
ttttccgaagcactgcaacgtttcttaattgaaaatccagtggtagcgcgtcaagtagtg
ggtaagagtacgatggcagcaagagcacgtatggccgctaaaaacgctcgtgaattgact
cgtcgcaaatcggcgttggaaatctcgagtttgccgggtaaactttcagattgttcttca
agagatccagctatcagtgaattgtatatcgttgagggtgactcagctggaggatctgca
aaaaatggtcgtgaccgtcacttccaagcgatcttgccattacgagggaaaatcctcaac
gtagaaaaagcacgtttggaccgtatcctagggaacgcagagattcgtatgatcattacg
gcactcggtacaggaatcggacctgaattcaacttagataaagcccgttaccacaagctt
gtcattatgacagatgctgacgtggatggagcccacatccggacgttattattaaccttc
ttcttccgtttcatgcgtccgttgatcgaggcaggctatgtgtacattgcacagccaccg
ctttaccgtgtgcgcgcagggaaaaaggaagagtattgttatgacgaagaggctttgcaa
gaaatcttgagcagaatgccagcttcaccgaaaccagacattacacgatacaaaggtcta
ggtgagatgaatccagaacagctatgggaaacaacaatggatcctgaaaagcgtacgttc
ttgcaagttcgtatggacgatgcaatagaagccaatgcaacatttgaagaactaatgggt
gacgaagtagagccacgcagaaaattcattgaagacaatgcagttttcgcacaaaatatc
gatacttga
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