Sporosarcina ureae: SporoP32a_13800
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Entry
SporoP32a_13800 CDS
T04877
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
sure
Sporosarcina ureae
Brite
KEGG Orthology (KO) [BR:
sure00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sure03400
]
SporoP32a_13800
Enzymes [BR:
sure01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SporoP32a_13800
DNA repair and recombination proteins [BR:
sure03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
SporoP32a_13800
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
NTPase_1
AAA_22
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ARK22517
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All DBs
Position
2844917..2848408
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AA seq
1163 aa
AA seq
DB search
MSLRFVTGRSGTGKTTFIEKEIAQELKERPMGAPIIVIVPDQLSYSMEYSLSVKSGLTGM
IRAQVLTFKRLAWRVLQEVGGITREEVDSFGYRMLVRSVLEENKESFKLFKQAASKHGFA
EQISDIMKEFSKYCIDQQAFTELKTSLAEKQAPRILQDKAHDLQLLLEKIEERLGTTYMD
SEGQLNALADQLAHSEWLQDASIYIDGFGDFTTQEYNIITQLMKYTKRVTVVLPMEEKVH
TSEHELFHTAQQQYETLQQLAYSESVDREERVHLTESQRFSNRELAHLEEQFDHYPPKAF
ESEGAIQIIEASNRRAEIHAVARSIRKMMREGKRYRGMTVLNRQPDVYNELIQNIFTQYD
IPVFISQKKPMLHHPLIEFARSLLEAVRTDWSYEAVFRAVKTDLFFPVNESKQVWRERAD
RLENFVLAKGIHGKSRWQDEERWKVSRYRGLEKIKTIQTDEELATQAEFAETRDLIREPI
EQLQQKLKAAVTGRDVAEALFYTLESLNVYDKIIELQQTEQKNNHLQAAAEHEQAWTSWI
NVLDQFVLMFGEKELPIAEAMKILDEGFDTLEFKLIPPSLDQVTVTTVELFNSMDVEAVF
VLGANEGILPLRNDHEGLLSDSDRELFSEIGITLAPTTKLQLMRESYMAYRAFTGASARL
TVSYPIADEEGKALIPSLYIPRLQQIVSNIPTEIAVIEPTELSEVKDKLVYIEHPDVALS
YAIRMMRQASTQEEIAPEWQAVLSYYKEDPLWSSVIESIIQPALKRQKTELLDSELTTGL
YGSSFTTSVSRIESYYSCPFQHFTTYGLNLQERFEFQLEAPDIGDLFHAALKWVSDEVMR
QGLSWAALTKEQCWQLGREAIDALAPKFFHRILLSSQRYAYIQRKLMQIIQRTIRALQSQ
ARNSSFTPIAIEAGFGPNEEIAPLEINLKNGQQMHIRGRIDRIDTMKKDDQTFLRVVDYK
SSARALDLTEVYYGLSLQMLTYLDVALEHAEDWLGVYANPAGVLYMYVHNPMLRLTKELN
EDAIEKELMKSYKMQGYIVEDADVALAMDDQLESESLIIPARLKKDGSFYSTSKVVPPED
INILRSYVRKKHQQAGDGMLSGDTRVYPYRLKEHMPCTFCSYQSICQFDSTDPTQPTRNY
TAYKSEESLEKMRKEIDPDANSR
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgtcattgcgcttcgttaccggacgttccggaacaggaaaaaccaccttcattgaaaaa
gaaatcgcacaagaactgaaagaacgcccaatgggagcccccatcatcgtcatcgtgccc
gaccaactatcctactcgatggaatacagcctatccgtcaagtcaggattaactggcatg
atccgtgcacaagtcctcacattcaaacgtctcgcgtggcgggtgctgcaagaagtaggc
ggcatcacacgtgaagaagtggacagcttcggttaccgcatgcttgtgcgtagcgtgcta
gaagagaataaagaatcgtttaagctatttaaacaagccgcttccaagcacgggttcgct
gaacaaatcagcgacatcatgaaagaattcagcaaatattgtatcgatcagcaagcgttt
acggaattaaaaacttcgctagcagaaaagcaagcgcctcgtattttgcaggataaggcg
catgatttacagctgttgcttgagaagattgaagaacgtctaggaacgacgtatatggac
agtgaagggcaattgaacgcactagctgatcagttggcgcattcagaatggttgcaggat
gcgtcgatctacatagacggcttcggtgatttcacgacacaggaatacaatataattacg
caattaatgaagtatacgaaacgtgtgacagtcgtattgccaatggaagaaaaagtgcat
actagtgagcatgagttattccatacggctcagcaacaatatgaaacacttcaacaactt
gcatacagtgagtcggtagatcgtgaagaacgcgtgcatttaacggagtcgcagcgcttt
tcaaatcgtgaattggctcatctagaagagcagtttgatcactaccctcctaaagcattt
gaatccgaaggggcaattcagatcattgaagcgtccaatcgacgtgcagagattcatgcg
gtagcgcgctcgatacgtaaaatgatgcgagaaggtaaacgatatcggggcatgacggtt
ttaaatcgtcaaccagatgtctataacgaattaattcaaaacatcttcacgcaatatgat
ataccggttttcattagccagaaaaagccgatgcttcatcatccattgattgaatttgcg
cgatcattgcttgaagccgtgcgcacggattggtcgtatgaagcagtgtttcgggctgtg
aagacggacctgtttttccctgtcaatgaaagtaagcaagtatggcgagagcgtgcagat
cgtctggagaatttcgtgctcgcaaaaggaattcatggtaaatcccgctggcaagacgaa
gaacgctggaaagtgagtcgctatagagggctcgagaagattaaaaccattcagacggat
gaagaactggcaacgcaggcggagtttgccgagacgcgcgatctgattcgggagccgatt
gaacagttacagcagaaattaaaagcagctgtgacaggaagagacgtagcggaagctttg
ttttatacgctggagtcactgaatgtctacgataaaataatagagttacagcaaactgaa
cagaaaaataatcacctacaagcagccgctgaacatgaacaagcgtggacgagttggatt
aatgtgctcgatcagttcgtgttgatgttcggagagaaagaattgccgattgcagaagcg
atgaaaatattggacgaaggattcgatacgctggaattcaaattaattccgccttcgctc
gatcaagtcactgtgacgactgtggagttatttaattcgatggatgtggaagcggtgttc
gtactcggcgcgaatgaaggaatattgccactgcgaaatgatcatgaaggattgctttcg
gatagtgaccgcgagttgtttagtgaaattggaattacgttggcacccacgacgaaactt
cagcttatgcgcgagtcgtatatggcgtatcgtgcgtttactggagccagtgcacgtttg
actgtcagttatccaattgctgatgaagaaggaaaagcgttgattccgtcgctttatatt
ccaagattgcagcaaatcgtatcgaatattcctacagagattgccgttattgagccgaca
gagttgtccgaagtaaaagacaagctggtctatatcgaacatccggacgttgcgctgtct
tacgcaattcgaatgatgcgccaagcatcgactcaagaagaaattgcgcctgaatggcaa
gcggttctctcctattataaagaagatcccctttggtcttcagttatagagtcgatcatt
caacccgcgttgaagcgacagaaaacggagcttcttgattcggaattgacgactggttta
tacgggtcatcctttacgacgagtgtctcgagaattgaatcgtattatagctgtccgttc
caacatttcacgacgtatggcttgaatttacaagagcgttttgaattccagctagaagca
ccggatatcggggatttattccatgcggcattgaaatgggtttcggatgaagtgatgcgc
caaggcttatcttgggcggcattgacgaaagagcagtgctggcagttaggccgagaagcg
attgatgcactggcgccgaagtttttccatagaattttattatcaagtcagcgctatgca
tatattcagcggaaattaatgcaaatcattcaacggacgattcgcgcattgcagtcacag
gctcgcaattcaagcttcacgccgattgcgattgaagcaggatttggtccgaatgaagaa
attgcaccgcttgaaatcaacctaaaaaatggtcaacagatgcatattcgcggacgcatc
gaccggatcgacacgatgaagaaagacgatcaaactttcttgcgcgtggtggattataaa
tcatcagcccgtgcgcttgatttaacggaagtgtattacggcttatcgctgcaaatgtta
acgtatctcgatgtggcgcttgagcacgcagaagactggttaggcgtctatgcaaatcct
gcgggtgtgctgtatatgtacgttcacaatccgatgttgcgattgacgaaagagttgaat
gaagacgctatcgaaaaagaattaatgaaatcatataaaatgcaaggctatatagtggaa
gacgcagatgtggcgctcgcaatggatgaccaactggaaagtgagtcactcattattccg
gcgcgtttgaagaaagacggctcgttttattcgacttcaaaagtcgtgccgcctgaagat
atcaatattttgcgttcgtatgtccgcaagaaacatcagcaagcaggggacggtatgttg
tccggcgatacacgcgtctatccgtaccgcttgaaggaacatatgccgtgtacattctgt
tcgtatcaatcgatttgtcagtttgatagtacggatccgacacagcctacacggaattac
acagcctacaagtcagaagagtcattagaaaagatgcggaaggagatagatccagatgcg
aattccagataa
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