Sporosarcina ureae: SporoP32a_14830
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Entry
SporoP32a_14830 CDS
T04877
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sure
Sporosarcina ureae
Brite
KEGG Orthology (KO) [BR:
sure00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sure03032
]
SporoP32a_14830
03400 DNA repair and recombination proteins [BR:
sure03400
]
SporoP32a_14830
Enzymes [BR:
sure01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SporoP32a_14830
DNA replication proteins [BR:
sure03032
]
Prokaryotic type
DNA Topoisomerases
SporoP32a_14830
DNA repair and recombination proteins [BR:
sure03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SporoP32a_14830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
DUF2996
zf_Rg
Motif
Other DBs
NCBI-ProteinID:
ARK22703
LinkDB
All DBs
Position
3057981..3060059
Genome browser
AA seq
692 aa
AA seq
DB search
MADYLVIVESPAKAKTIERYLGKKYKVSASLGHLRDLPRSQMGVDTENNYEPKYITIRGK
GPILQELKKEAKKAKKIFLAADPDREGEAIAWHLSHQLGVDIESDCRVVFNEITKDAIKE
SFKHPRPIDMDLVDAQQARRILDRLVGYNISPILWKKVKKGLSAGRVQSVALRLIIDREN
EINAFEPEEYWSITSQFTKGDKTFEAQFYGDASEKVKLTNQEQVEKIVNSIKPDEFEVSK
VVKKERKRNPALPFTTSSLQQEAARKLNFRARKTMMLAQQLYEGIAIGKKEGTVGLITYM
RTDSTRISDTAKEEVKSFIHTMYGEEFISTSTKKAKAKAKTQDAHEAVRPTSAMRTPDAM
KAFLSRDQYRLYKLIWERLVASQMAPAVLDTVTADFLNEDIRFRASGSQVKFPGFMKVYI
EGNDDQQEEKENILPPLEEGERIKYADVDPKQHFTQPPPRYSEARLVKTLEELGIGRPST
YAPTLDTIQKRGYVTLDAKRFIPTELGGIVHQAVNQYFPDIIDIEFTRQMEQRLDHVEEG
EIEWRTVIDEFYRDFEKHVEVADAEMEKIEIKDEPAGEDCEKCGSPMVYKMGRYGKFMAC
SNFPDCRNTKAIIKPIGVTCPKCKEGEVVERKSKTKRIFFGCDQYPECDYVSWDKPISRP
CPKCQNTMVEKRLKKGVQIQCTECDYKEEPQS
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggcagattacttagtaatagtggaatcgcctgctaaagcgaaaacgattgaacgttac
ttaggaaaaaagtataaagttagtgcatcacttggtcatttacgtgatttaccccgcagt
caaatgggagtagataccgaaaataattatgaaccgaagtatataacgattcgtggaaaa
ggtccgatacttcaagaattaaaaaaagaagcaaaaaaagcgaagaaaatatttctcgcg
gctgacccggatcgcgaaggggaagcaatagcttggcatttatcgcatcaattgggagtg
gatattgaatcagattgccgcgtagtcttcaatgaaatcacaaaagatgcaatcaaggaa
tcatttaagcatccgcgtcctattgatatggacttagtggatgcgcaacaagctagaaga
atcctggacagattggtaggctataacattagcccgatcctttggaagaaagtaaaaaaa
ggattatccgcgggacgagtacagtcagttgcattacgattaatcattgaccgagaaaat
gaaatcaatgcatttgaaccggaagagtactggtcgatcacatcccagtttactaaaggt
gataaaacttttgaagcgcaattttatggtgatgcttcagaaaaagtcaaattgacaaac
caagaacaagtagaaaagatagtcaattcaatcaaaccggatgaatttgaagtatcgaaa
gtagtaaagaaagaacgtaaacgtaatcctgctttaccgtttacaacctcatcgcttcag
caagaagcagcccgaaagctgaacttccgtgcaagaaaaacgatgatgctcgcgcaacaa
ttatatgaaggaattgcaattggaaaaaaagaaggtacagttggtttaattacgtatatg
cgtaccgactcgacaagaatttccgatacagcaaaagaagaagtaaaatcattcatccac
acgatgtacggggaagagtttatttcaactagtaccaaaaaggcgaaagctaaagcaaag
acgcaggacgcgcacgaagctgtacggccaacttctgctatgcggacaccagatgcgatg
aaagcgttcttatcaagagatcagtatcgcttatacaaactcatttgggaacggcttgtt
gcaagtcaaatggcgccagcagttttggatactgtaaccgcagatttcttaaatgaggat
attcgatttagagcatcgggttctcaagtgaaatttccgggcttcatgaaagtttatatc
gaaggcaatgatgatcaacaagaagaaaaagaaaatattttaccgcctcttgaagaagga
gaacgtattaaatacgcggacgtggatccgaaacagcacttcacacagccgccaccaaga
tattcggaagctcgcctagtgaagacacttgaagaactaggtataggtagaccttctacg
tatgcaccgacacttgataccattcaaaaacgtgggtatgttaccttggatgctaaacgc
tttattccaacagaacttggaggaatcgttcatcaggcggtaaatcaatatttcccggac
atcattgatattgaattcacgagacaaatggaacagcgtcttgaccatgtcgaagaaggc
gaaatagagtggcgaacagtaatcgatgaattctatcgtgatttcgaaaaacacgtagaa
gttgcagatgctgaaatggagaaaattgaaatcaaggatgaaccagcgggtgaggattgt
gagaaatgtggttcgccgatggtttataagatgggtcgctatggaaaattcatggcttgc
tctaatttcccagattgccgtaatacaaaagccattattaagccgattggcgtgacgtgt
ccgaagtgtaaagaaggcgaagttgtcgagcgtaagagtaagacgaagcgaatcttcttc
ggttgtgatcaataccctgaatgcgattatgtttcatgggataaaccgatttcgagaccc
tgtccaaaatgtcagaacacaatggtcgaaaaacgcttgaaaaaaggtgttcagatccaa
tgtacagaatgtgattacaaagaagaaccacaaagctaa
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