Sporosarcina ureae: SporoP32a_15235
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Entry
SporoP32a_15235 CDS
T04877
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
sure
Sporosarcina ureae
Pathway
sure03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sure00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SporoP32a_15235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sure03019
]
SporoP32a_15235
Messenger RNA biogenesis [BR:
sure03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SporoP32a_15235
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
DUF4229
Motif
Other DBs
NCBI-ProteinID:
ARK22778
LinkDB
All DBs
Position
3141565..3143124
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AA seq
519 aa
AA seq
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MGIEILISVLLSLIVGAVVSFFILKNVNDSKVTGAKHTANQLVEEAKREAESVKKEALLE
AKDETHELRIEAETEVRERRTELQKQENRLLQREENLDRKDDALNKREAGLERKEDALLE
RQQHIEEMERKAEELVTTQKTELERISSLTRDEAKRVILEDVEEELSTDIAVMTKESEQR
AKEESERKAREILSLALQRFAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLTG
IDLIIDDTPEAVILSGFDPVRRETARLALEKLVQDGRIHPARIEEMVDKSRREVDELIRE
KGEQTTFDVGVHNLHPDMIKILGRLHFRTSYGQNVLKHSIEVAYLTGLLAAELGEDVTLA
RRAGLLHDIGKAIDHEVEGSHVQIGKELAVKYKEHPVVINSIASHHGDEEATSVIAVLVA
AADALSAARPGARSETLENYIKRLQKLEEISESYEGVEKSFAIQAGREVRIIVRPEQIDD
ITAHRLARDIRKQIEEELNYPGHIKVTVIRETRAVEYAK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgggtattgaaatactcatctccgttttgctaagtctcatcgtcggtgcagttgttagc
ttttttatattgaagaatgtgaatgattcaaaagtgactggtgccaagcatactgccaac
caactcgtcgaagaggcgaagcgtgaagcggagtcagtgaagaaagaggcactgttagaa
gcgaaagatgaaactcacgaactgcggattgaagcagaaacagaagtccgtgagagaagg
acggaattacagaaacaagaaaaccgtctcttacagcgtgaagaaaaccttgatcgcaag
gatgatgcgctcaataaaagagaagcaggtctagagcgcaaagaagatgcgctattagaa
agacaacagcatattgaagagatggaacgcaaagcggaagaacttgttactacacagaag
accgaactggaaagaatctcttccttaacaagagatgaagcaaaacgcgtcatcttggaa
gatgtagaagaagagctttctacggatattgcagtcatgacgaaagaatccgagcaacgg
gctaaagaggaatccgagcgtaaagcacgtgaaatcctttcattggcactgcaacgattt
gcagcagatcatgtggcagaaacaacagtctccgtcgttaatttaccgaatgatgaaatg
aaaggtcgcatcattggtcgtgaagggcgaaatattcgtacactcgaaacacttacgggt
attgatttgattattgacgatacgccagaagcagttatcctatctggttttgatccggtt
cgtagagagacagcaagattagctcttgagaaattagttcaggatggtcgtatccaccct
gcacgtatcgaagagatggtcgacaagtctagaagagaagtggacgagctgattcgcgaa
aaaggagaacaaactacattcgatgtgggtgttcataatttacatccggatatgatcaaa
attttgggtcgtctacacttccgtacaagttacggacaaaatgttttgaagcactccatt
gaagtagcatacttaacaggcttgcttgcagctgagttgggtgaagatgttacacttgct
agacgggccggtttacttcacgatatcggtaaagctatcgatcatgaagtagaaggaagt
cacgtgcagatcggtaaagagcttgcagtgaagtataaagaacatccggttgtcatcaat
agtattgcttctcaccacggtgacgaagaagcaacatctgttatcgcagtgctagtcgca
gcagcggatgcattatctgcagcaagaccaggtgcacgaagtgaaacattagaaaactat
ataaaacgtttgcaaaaactcgaagaaatttcggaatcatatgaaggtgtggagaagtca
tttgccattcaggcaggacgggaagtgcgtatcattgtccgccccgaacagatcgatgat
attaccgcacatcgcttagcacgtgatatacgaaaacaaatcgaagaagaattaaactat
ccagggcatattaaagtgacggtcatacgggagacccgtgcagtagaatatgcaaaataa
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