KEGG   Sporosarcina ureae: SporoP32a_15295
Entry
SporoP32a_15295   CDS       T04877                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
sure  Sporosarcina ureae
Pathway
sure02024  Quorum sensing
sure03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sure00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SporoP32a_15295
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SporoP32a_15295
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sure03019]
    SporoP32a_15295
   03036 Chromosome and associated proteins [BR:sure03036]
    SporoP32a_15295
Messenger RNA biogenesis [BR:sure03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     SporoP32a_15295
Chromosome and associated proteins [BR:sure03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    SporoP32a_15295
SSDB
Motif
Pfam: Hfq Hfq_1 LSM
Other DBs
NCBI-ProteinID: ARK22790
LinkDB
Position
3156266..3156490
AA seq 74 aa
MAQGNMQDTFLNSLRKNNTFVTIFLLNGFQLKGLIKSYDNYTVLLESDGKQQLIYKHAIS
TYAPSKPVILKDEQ
NT seq 225 nt   +upstreamnt  +downstreamnt
atggcacaaggaaatatgcaagatacgtttttgaattctttacgtaagaacaacacattc
gttacaatctttttgcttaacggttttcaattgaaaggtctaatcaagtcatatgacaat
tataccgttctactcgagtcagatggtaaacaacagctgatttataagcatgcaatctct
acgtatgctccttcgaaaccggttattttaaaagatgaacaataa

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