Sporosarcina ureae: SporoP32a_15660
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Entry
SporoP32a_15660 CDS
T04877
Name
(GenBank) hypothetical protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sure
Sporosarcina ureae
Pathway
sure03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sure00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SporoP32a_15660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sure03019
]
SporoP32a_15660
03400 DNA repair and recombination proteins [BR:
sure03400
]
SporoP32a_15660
Enzymes [BR:
sure01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SporoP32a_15660
Messenger RNA biogenesis [BR:
sure03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SporoP32a_15660
DNA repair and recombination proteins [BR:
sure03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SporoP32a_15660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ARK22860
LinkDB
All DBs
Position
3228152..3229591
Genome browser
AA seq
479 aa
AA seq
DB search
MELQEVLHQKFGYESFRPGQQEVITEILAGRDAVAIFPTGMGKSLCYQLPAYMLNGAVVI
ISPLVALMEDQVANLRKHKEKRVVAINSFLSRQEKELALSTLSQYKFIFLSPEMMMQKPV
QQLVNQLHIAFFVVDEAHCISEWGFDFRPDYLRLKELFAVSRRAPVLALTATANKKVVGD
ITTYLQMNNPYIERQPMDRTAISYRVLKMDNELAKTEWIIDRLSTTIGPGIIYVASRKRA
DELSAIIRERGIATASYHGGKEQDERSIIQEQFVQGELEWICATNAFGMGIHKDDIRQII
HEHIPATPSAYIQEVGRAGRDGGKAAATLLYNDRDIQKVKFIVYGDLPDEQQTLYYSSLL
QAGTGEQLAAEQAGLSEVSSRLLDYYLEQFDVENVVRQIQQIYHVKEKQIEEMESYIKCD
SCLRRKLVQFFDENTSPAEMDCCSNCQNLDDSWLMKSESLPERVAKPLQWRERLHQLLG
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggagctacaggaagttttgcatcaaaaatttgggtatgaatcatttcgtccaggacaa
caagaagtcattacagaaattctcgcaggaagagatgcggtagcgattttccctacaggc
atggggaaatccctttgctatcagttacctgcgtatatgctcaatggtgcagtcgtcatt
atctctccgctcgttgcgttaatggaagatcaagttgctaatttacgtaaacataaagag
aaacgtgttgtggccattaattcattcttgtccagacaagagaaagaattagcgctgtct
actttatctcaatataaatttatttttttatctcctgaaatgatgatgcaaaaacctgtt
caacaactcgtcaaccaattacatattgcttttttcgtagtagatgaagcgcattgtatt
tcagagtggggatttgactttcgtccagactatttgcgcttaaaggaactatttgcagtt
tcaagaagagcaccggttttggcattaacggctactgcgaataaaaaagtagtgggggat
atcactacgtatttgcaaatgaataacccgtatattgaacgtcagccgatggatcgaacg
gctatttcgtatcgtgtattgaagatggacaatgaattagcaaagacagaatggattatc
gacaggctttctacgacaatcggtcctggtataatttatgtagcttcacgaaagcgagcc
gatgaactttctgcaatcatcagagaaagaggcatcgcgactgctagttaccacgggggc
aaagaacaggacgaacggtcaatcattcaagaacaatttgtccaaggagaacttgagtgg
atctgcgcgactaatgcattcggtatgggaattcataaagatgatattcgacaaattatt
catgaacatatccctgccactcccagtgcgtatatacaagaagtcgggcgtgcagggcgt
gacggaggaaaggcagccgccactcttttgtataatgatcgagatattcagaaagtaaaa
ttcattgtctatggagatttgcccgatgaacagcaaacactttattattcttctttattg
caagcgggaactggagagcaattggctgcagaacaagcaggattgtctgaagtctcatcc
cgtctacttgattattatttggaacaatttgatgtggaaaatgtcgttcgacaaatccag
cagatttatcatgtaaaagagaaacaaattgaggaaatggaaagttatataaaatgtgat
agttgcttacggagaaaattagtgcagttttttgacgaaaacacctcaccagcagaaatg
gattgctgttcaaactgccagaatcttgacgatagctggctaatgaaatcagaatcttta
cctgaaagggtcgctaagccgttacaatggcgtgaacgactgcatcaattattaggttga
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