Sporosarcina ureae: SporoP32a_16200
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Entry
SporoP32a_16200 CDS
T04877
Name
(GenBank) hypothetical protein
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
sure
Sporosarcina ureae
Pathway
sure03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sure00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SporoP32a_16200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sure03400
]
SporoP32a_16200
Enzymes [BR:
sure01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SporoP32a_16200
DNA repair and recombination proteins [BR:
sure03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SporoP32a_16200
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
SH3_13
OB_YrrC
UvrD_C_2
Viral_helicase1
AAA_11
AAA_22
AAA_12
AAA_28
AAA_18
AAA_16
UvrD-helicase
nSTAND3
TsaE
RsgA_GTPase
AAA_14
AAA_33
AAA_17
JHBP
NPHP3_N
AAA
UvrD_C
Rad17
Zeta_toxin
AAA_25
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
ARK22958
LinkDB
All DBs
Position
3329410..3331836
Genome browser
AA seq
808 aa
AA seq
DB search
MSETAPYLIGRPVVTIFHNTTNLFSIVKLKVTSTNTDYRDSEIVIKGSFPPLVAEEDYKF
TGRLVNHPVHGQQFDVQTFSKELPATEAGLILYLSGDLFPGIGKKTASDIVKTLGNNVIQ
KVLEDRSVLDQIPRLSDERKDTLVSVLQENLGLERTMVQLNEWGFGPQVAMRIYQAYQDD
AITILTENPYRLIKEIEGIGFQRADDLAKQLGLVGDHPARIKAAVYYSVHSEVQSAGHVY
VESGVILPQAKQLLESSQAHIISYESITQAVIELVEEGTLSAEMQRLYLPSLYFSEIGIA
AKVNKILENEVAEQFPASEIRKAIGEIEERLEVQYAETQVEAIERALHSSLLVLTGGPGT
GKTTVIRGLVEAYAELHGISLDLDEYARKKEPFPIILAAPTGRAAKRMSESTGLPAMTIH
RLLGFTGQDAEEETEREVDGNLIIIDETSMVDTWLMHQLLKAVRNDAQLLFVGDQDQLPS
VGPGQVLHDFMQSGKIPVVELTDIFRQSEGSTIIEMAHMIKQKEWTMDVTKKTSDRSFIK
ASSDQILPAVKQIIQNATSKGHSIKDIQVLAPMYKGPAGIDGLNKMIQEVTNPPAEGRKE
MVFGETTYRVGDKVLQLVNQPESNVFNGDMGEVVAIMLAKETTDKKAIMVVSYDGNEVQY
ERSDLNQLTLAYCCSIHKSQGSEFPIVVMPIVRSQRKMLRRNLLYTGITRAKNFLILCGE
AEEFKAGIARTDETERQTTLQERITGETQEVQTTQTVETISLDTAPAKVTAEPQDMSQAK
LTMDNFTAIDPLIGMNNVSPLDFLEVTD
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaacagcaccatatctaatcggtaggccggtcgtgacgattttccataatacg
acgaatctattttccatcgtcaagttaaaagtcacttccaccaatactgattaccgcgac
agtgaaatagtgatcaaaggctctttccctcctctcgtcgcggaagaagattacaaattc
acaggacgactcgttaaccatccagtacatggacagcagttcgacgtgcagacattctca
aaagagttgcctgcgacagaggcgggtctgatcctgtacttatctggtgatttatttcct
ggaatcgggaagaaaacagctagtgatatcgtgaagacactcggcaataacgtcatccag
aaagtccttgaagaccgcagtgtactggatcagattccgcgtttgagtgacgaacggaaa
gatacgctcgtttcagtcttgcaggagaatctaggtcttgaacgtactatggtgcaactc
aatgaatggggcttcggtccacaagtggctatgcgtatataccaagcgtatcaagatgat
gccatcacgattctgacagaaaatccatatcgtttaattaaagaaattgaagggatcggc
tttcaacgtgcagatgatctcgcgaagcaactcgggctcgtaggagatcatcctgcgcgt
attaaagcagctgtttattacagcgtacatagtgaagtacagtcagcaggacatgtctac
gtagagtcaggggtgatcttgcctcaagcgaagcagctacttgaatcgagtcaggcacat
attatctcgtacgaatcgatcacccaagccgtgattgaactcgtcgaagaaggcacactg
tctgctgaaatgcagcgactctatttaccctctctttatttttcggaaattgggattgcc
gctaaagtcaataaaattctcgaaaatgaagtcgcggaacaatttcccgcttctgaaata
cgaaaagcaattggtgaaatagaggaacgtttggaagtgcagtatgccgaaacgcaagta
gaagcgatcgaacgcgcccttcattcttcattactcgtgctaacaggtggacccgggaca
ggtaagacaaccgtcataagaggtttagttgaggcgtacgcagaactgcatggtatctca
cttgacctcgacgaatatgcacgtaaaaaagaaccgtttccgatcatcttggcagcccct
accggacgcgcagcgaaacggatgtccgaatcaaccggattacctgccatgacgatccac
cgcctactcggatttacgggtcaggacgccgaagaagagacggagcgggaagtggatggc
aatctcatcatcattgacgaaacgtccatggtcgatacgtggctcatgcatcagctgtta
aaagctgtccgcaatgatgcacagttattattcgttggagatcaggatcaactaccttct
gtaggacctggtcaagtgttgcatgacttcatgcagtcaggaaaaattccggtcgttgaa
ctgaccgatattttccggcaaagtgaaggctcaaccatcatcgaaatggcccatatgatc
aagcaaaaagaatggacgatggatgttacaaagaagacgtcggatcggtcgtttattaaa
gcgtcgagtgatcaaattttgcctgcagttaaacaaatcattcaaaacgccacatccaaa
gggcattccattaaagatattcaagtgctagcgccgatgtacaaaggtccagcaggcata
gatggtttgaataagatgatacaagaagtcacgaatccacctgccgaaggaagaaaagaa
atggttttcggagaaacgacgtatcgtgtcggggataaagttctgcaactcgtcaatcag
ccggaaagtaatgttttcaatggggatatgggagaagtcgttgcgatcatgctagcgaaa
gaaacgactgacaaaaaagcgatcatggtcgtttcgtacgacggcaatgaagtgcaatac
gagcgaagcgacttgaatcagctgacacttgcgtattgttgttctattcataaatcccaa
ggtagcgaatttccaatcgttgtcatgccgatcgtcagaagtcagcggaaaatgttacgg
cgtaatctgctgtacacagggattacgcgtgcaaagaacttcttaatactttgcggtgaa
gcagaagaatttaaagcaggcattgcgcgcaccgacgaaaccgagcgacagacgacactt
caagaacgcataactggggaaacacaagaagttcagactacacaaaccgtggaaacaatc
tcactcgatacagcacctgcaaaagtgacggctgaaccacaagatatgtcacaagcgaag
ttaacgatggacaattttactgcaattgatccgctcataggtatgaacaatgtgtcacca
ctcgactttcttgaagtgactgattga
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