Serratia ureilytica: J0X03_03170
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Entry
J0X03_03170 CDS
T07185
Symbol
speF
Name
(GenBank) ornithine decarboxylase SpeF
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
suri
Serratia ureilytica
Pathway
suri00330
Arginine and proline metabolism
suri00480
Glutathione metabolism
suri01100
Metabolic pathways
suri01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
suri00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
J0X03_03170 (speF)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
J0X03_03170 (speF)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
J0X03_03170 (speF)
Enzymes [BR:
suri01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
J0X03_03170 (speF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
QSR09632
LinkDB
All DBs
Position
689613..691778
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AA seq
721 aa
AA seq
DB search
MKELKIATSASLVATIETLRQIVRVEQTDYTDVAAVVVSVADVDAGILARLQATGFDIPT
FVAVEGDEHLSPDYLPFVSGVFALLAGASKPFYMAQLEAAADAYEQALLPPFFKTLKTYV
EMENSTFACPGHQGGEFFRKHPAGRQFFDFYGETLFRSDMCNADVKLGDLLIHEGSAKDA
QKHAARVFNADKTYFVLNGTSAANKVVTNALLTRGDLVLFDRNNHKSNHHGALIQAGATP
VYLETARNPFGFIGGIDARCFDERYLREQIREVAPEKATAARPFRLAIIQLGTYDGTIYN
ARQVIDTIGHLCDYILFDSAWVGYEGFIPMLKECSPLLLELDEHDPGIFVTQSVHKQQAG
FSQTSQIHKKDDHIKGQKRHCNHKHLNNAFMLHASTSPFYPLFAALDVNAKMHAGPAGRR
MWMDCVKLGIETRKQLLTRCSQLKPFIPLQVAGKDWQDYDTDLIANDARFFTFVPGETWH
GFEGYAQDQYLVDPCKLLLTTPGIDAATGQYTEFGVPATILANFLRENGIVPEKCDLNSI
LFLLTPAENPAKMEQLVEMLAQFERYVEEDAPLSVVLPTVYRKNEQRYRGYSIRRLCQEM
HDLYVSFDVKQLQKEMFRQDHFPPVVMNPQDANVEFIRDNVELVPIGQAEGRIAAEGALP
YPPGVLCVVPGEVWGGAVQRYFLALEEGINRLPGFSPELQGVYIEKKDHGWKRIFGYMIK
P
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaattgaaaatcgcaaccagcgccagcctggtcgccaccattgagacgctgcgc
cagatcgtgcgcgtagagcagacggactacaccgacgtggcggcagtggtggtgtcggtc
gccgacgtggatgccggcattctggcgcgcttgcaggcgacggggttcgatattccgacc
ttcgtggcggtggaaggggacgagcatctttccccggattatctgccgtttgtcagcggg
gtctttgcgctgctggccggcgccagcaagccattctacatggcgcagctggaggccgct
gccgacgcctacgagcaggcgctgctgccgccgttcttcaaaacgctgaagacctacgtc
gagatggagaattcgacctttgcgtgtccaggacatcagggcggcgagttcttccgcaag
cacccggccggccggcagtttttcgatttctacggtgaaacccttttccgttccgacatg
tgcaacgccgacgttaagctgggcgatctgctgatccacgaaggctcggccaaggatgcg
caaaagcatgcggcgcgggtgttcaacgctgataaaacctacttcgtgctcaacggcacc
tcggcggccaacaaggtggtgaccaacgcgctgctgacccgtggcgatctggtgctgttc
gatcgcaacaaccacaaatccaatcaccacggggcgctgatccaggccggcgccacgccg
gtgtatctggaaaccgcccgcaacccgttcggctttatcggcggcatcgatgcgcgctgc
ttcgatgagcgctacctgcgcgagcagatccgcgaggtggcgccggagaaggccacggcg
gcgcggccgttccggctggcgatcattcagcttggcacctacgacggcacgatttacaac
gctcgccaggtgatcgacaccatcggccacctgtgcgattacatcctgttcgactccgcc
tgggtgggctacgaaggttttatcccgatgctgaaagagtgttcgccgttgctgctggag
ctggacgaacacgatccgggcattttcgtcacccagtcggtgcataaacagcaggcgggg
ttctcgcagacgtcgcagatccataagaaagacgaccatatcaaagggcaaaagcgccac
tgcaaccataagcatctgaacaacgcattcatgctgcatgcgtcgaccagcccgttctat
ccgctgttcgccgcgctggacgtcaacgccaagatgcacgccggccccgccgggcgccgc
atgtggatggactgcgtcaagctgggcatcgagacgcgcaaacagctgctcacgcgctgc
tcgcagctgaagccgtttattccgctgcaggtggcgggcaaggactggcaggattacgat
accgatctgatcgccaacgacgcgcgcttcttcaccttcgtaccgggggagacgtggcac
ggcttcgaaggttacgcccaggatcagtatttggtcgatccgtgcaagctgctgctgacc
acgccggggattgacgccgcgaccggccaatacaccgagttcggcgtgccggccaccatt
ctggccaacttcctgcgcgagaacggcatcgtgccggagaagtgcgatctcaactcgatc
ctgttcctgctgaccccggcggagaacccggccaagatggaacagctggtggagatgctg
gcgcagttcgaacgctatgtcgaagaggatgcgccgctgagcgtggtgctgccgacggtg
taccgcaagaacgagcagcgttaccgcggctacagcattcgccggctgtgccaggagatg
cacgatctgtacgtcagctttgacgttaagcagctgcaaaaggagatgttccgtcaggat
catttcccgccggtggtgatgaacccgcaggacgccaacgtggagtttatccgcgacaac
gtcgagctggtgccgatcggccaggcggaagggcgcatcgcggcggaaggggccctgccg
tatccgccgggcgtgctgtgcgtggtgccgggcgaagtgtggggcggcgcggtgcagcgc
tacttcctggcgctcgaggagggcatcaaccgcctgccgggcttctcgccggagctgcag
ggggtctacatcgagaaaaaagatcacggctggaagcgcatcttcggctatatgatcaag
ccatga
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