Serratia ureilytica: J0X03_03425
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Entry
J0X03_03425 CDS
T07185
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
suri
Serratia ureilytica
Pathway
suri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
suri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J0X03_03425 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
suri03019
]
J0X03_03425 (pcnB)
Enzymes [BR:
suri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
J0X03_03425 (pcnB)
Messenger RNA biogenesis [BR:
suri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
J0X03_03425 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
QSR08057
LinkDB
All DBs
Position
complement(743212..744528)
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AA seq
438 aa
AA seq
DB search
MTVIPREQHSISRKDISENALKVLYRLNKSGYEAYLVGGGVRDLLLGKKPKDFDITTNAT
PEQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEQNQESDKNSSQQAQNGMLLR
DNIFGSIEEDAQRRDFTINSLYYGVADFTLRDYVGGLNDLKQGVIRLIGDPETRYREDPV
RMLRAVRFAAKLDMRISEETAEPIPRLASLLHEIPPARLFEESLKLLQAGYGFQTYLKLC
EYQLFQPLFPLIARNFTPNHDTPMERILVQVLKNTDHRLQNDMRVNPAFLFAAMLWYPLL
EHAQKLAQESGLAYYDAFALAMNDVLDEQCRSLAIPKRITTLVRDIWQLQLRLSRRQGKR
AHKLMEHPKFRAAYDLLALRAEVEDNQEMLRLAEWWGEFQDATPARQKAMLSTLGDDPAP
RRARQRRPRRRAPRKEGA
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtgatcccgcgcgaacagcactcgatctcccgcaaagacatcagcgaaaatgcg
ctgaaagtgctttaccgcctgaacaagtccggctacgaagcctatctggtcggcggcggc
gtgcgcgatctgttgctcggcaaaaagccgaaagacttcgacatcaccaccaacgctacg
ccggagcaagtgcgcaagctgttccgcaactgccgcctggtcggccgccgcttccgcttg
gcgcacgtgatgttcgggccggagatcatcgaagtggccactttccgcggccaccacgaa
cagaatcaggaatccgacaagaactcgtcccagcaggcgcaaaacggcatgctgctgcgc
gacaacatcttcggctcgatcgaggaagatgcccagcgccgtgatttcaccatcaacagc
ctgtactacggcgtggcggatttcaccctgcgcgattacgtcggcggcctgaacgatctg
aaacaaggcgtgatccgcctgatcggcgatccggaaacccgttaccgcgaagatccggtg
cgcatgctgcgcgcggtgcgcttcgccgccaagctggatatgcgcatcagtgaagagacc
gccgagccgatcccgcgcctggcttcgctgctgcatgagatcccaccggcgcgtctgttc
gaagaatccctcaagctgctgcaggcgggttacggtttccagacctacctgaagctatgc
gaatatcagctgttccaaccgctattcccgctgatcgcccgcaacttcacgccgaaccac
gatacgccgatggagcgcattctggtgcaggtgctgaagaacaccgatcatcgcctgcag
aacgacatgcgcgtcaatccggccttcctgtttgccgccatgctgtggtacccgctgctg
gagcacgcgcagaaactggcgcaggaaagcggcctggcgtactacgacgccttcgcgctg
gcgatgaacgatgtgctcgacgagcagtgccgctcgctggcgatcccgaaacgcattacc
acgctggtgcgcgatatctggcagcttcagctgcgcctgtctcgtcgtcagggcaaacgc
gcgcacaaactgatggaacatccgaaattccgtgccgcctatgatttgctggcgctgcgt
gcggaagtggaagacaatcaggagatgctgcgtctggccgagtggtggggtgagttccag
gacgccacgccggcacggcagaaagccatgctgagcaccctgggtgacgatccggcgccg
cgtcgcgcgcgtcaacgccgtcctcgtcgccgggcaccgcgtaaagaaggggcataa
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