Serratia ureilytica: J0X03_04295
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Entry
J0X03_04295 CDS
T07185
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
suri
Serratia ureilytica
Pathway
suri03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
suri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
J0X03_04295 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
suri03400
]
J0X03_04295 (recC)
Enzymes [BR:
suri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
J0X03_04295 (recC)
DNA repair and recombination proteins [BR:
suri03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
J0X03_04295 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Peptidase_M16_C
Motif
Other DBs
NCBI-ProteinID:
QSR08217
LinkDB
All DBs
Position
929707..933078
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AA seq
1123 aa
AA seq
DB search
MFTVYHSNQLDLLKTLTSALIARDPLADPFQQEVVLVQSPGMAQWLQMQLAEQFGIAANV
AFPLPATFIWDMFTRVLPDIPKESAFSKDAMTWKLMWLLPEMLTQPAFAPLQHYLTDDGD
KRKIHQLAGRVADLFDQYLVYRPQWLESWQRGERIDGLPEAQQWQAPLWARLVEYTRELG
QPEWHRANLYSRFIHALEQATTCPPGLPPRVFICGISALPPVYLEALQALGRHIDIHLMF
TNPCRYYWGDIQDYAFLARLQSRKRRHYHQAREQGLFREPADAARLFDAEGQQQLSNPLL
ASWGKLGRDHLYLLSQMEGAQEVDAFVDIPADTMLHAVQRDMLELEDHAVIGITAETLES
SFSKRRLDPQDRSLSLHACHSPQREVEVLHDQLLTMLAQDPALTSRDIIVMVADIDSYTP
YIQAVFGNAPAERYLPFAISDRKARQAHPALQAFISLLDLPQSRFTSEQVLALLEVPALA
ARFAIGEEGLRLLRHWVGESGVRWGLDDDNVRELDLPATGQHTWRFGITRMLLGYAMDSN
AGDWQGILPYDESSGLVAELAGQLADLLAQLSHWRQVLSEARSLEAWLPLCRQLLDAFFE
ADSDTEVVLALIEQQWQQAINFGLAARYPDDVPLTILRDDLAARLDQERISQRFLAGQIN
FCTLMPMRSIPFKVVCLLGMNDGVYPRTLPPLGFDLMAQQVKRGDRSRRDDDRYLFLEAI
LSAQQRLYISFIGRSIQDNSPRYPSVLVTELLEYLEQSYCLPGDEACTADDSARRVGEHL
LKWHARMPFAAENFLPGSEAQSYAAEWLPAADGRGAAHPAFNQLLPAETLQQISLDELLR
FYRHPIRAFFQLRLGVSFILEETELPDEEPFTLDNLSRYQFNSQLLNTLIDGDDPERLFQ
RVRAAGGLPYGAFGEIYWQKQQEEMSELAEQVRAERAQSHSLELDIDIAGVRLSGWLHQV
QDDGLLRWRPATLSAVDGILLWLEHLVYCCAGGTGESRMYGRKNSAWRFAALAPEEAQAQ
LAELLAGYQRGLCQPLLLLNKSGWAWLSQCYQPETQQIDWEEEAQTKARAKLLQAWQGDQ
RIPGEGEDPYVQRVFRQLDNDYLAQILAETERYLLPVACHNLG
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgttcacggtttatcattccaatcagctggatttattgaaaacgctgaccagcgcgctg
atagccagagatccgttggccgatccttttcaacaggaagtggtgctggttcagagcccc
ggtatggcgcaatggctgcaaatgcagctggcggagcagttcggcatcgccgccaatgtc
gcgtttccgctgccggcgaccttcatttgggacatgttcacccgagtgttgccggatatc
ccgaaagagagcgccttcagcaaggacgccatgacctggaagctgatgtggctgctgccg
gagatgctgacccagccggcgttcgcgccactgcagcactatctcaccgatgacggcgac
aagcgcaaaatccaccaattggccggccgggttgccgaccttttcgaccagtatttggtt
tatcgcccgcagtggctggagagctggcagcgcggcgaacgcatcgacggtctgcccgag
gctcagcagtggcaggcgccgctctgggcgcggctggtggagtacacgcgcgaattgggg
cagccggaatggcaccgcgccaatctgtacagccgctttatccacgcgctggagcaggca
acaacgtgtccgcccggtttgccgccgcgggtgtttatctgcggcatctcggcgttgccg
ccggtctatctggaggcgctgcaggcgctggggcggcatatcgatatccacctgatgttc
accaacccttgtcgttattactggggcgacattcaggattacgctttcctggcccgcttg
cagagccgcaagcgccgtcactatcatcaggcgcgcgagcaagggctgtttcgcgaaccg
gctgacgcggcgcgtctgtttgacgctgaagggcagcagcagctcagtaacccgctgctg
gcctcctggggcaagctcgggcgcgatcacctctatttgctgtcgcagatggaaggggcg
caagaggtcgacgcctttgtcgatatcccggcggataccatgctgcacgccgttcaacgc
gatatgctggagctggaagatcacgcggtgatcggcatcacggcggaaacgctggaaagc
agtttcagcaagcgcaggctcgatccgcaagatcgttccctcagcctgcacgcctgccac
agcccacagcgggaagtggaggtgctgcacgatcaactgctgaccatgctcgcgcaggat
cccgcgttgacgtcgcgcgacatcatcgtgatggtggcggatatcgacagctatacgcct
tatattcaggccgtgttcggcaatgctcccgccgagcgctacctgccgttcgccatttct
gaccgtaaagcgcgacaggcgcatccggctttgcaggcgttcatctccctgctcgatctg
ccgcaaagccgctttacgtcggaacaggtgctggcgctgttggaagtgccggccctggcc
gcccgtttcgccattggcgaagaggggctgcgcctgttgcgtcactgggtcggtgaatcc
ggcgtgcgctgggggctggacgacgataacgtgcgagaactggatctgcccgccacgggc
cagcacacctggcgattcggcattacgcgcatgctgctcggttacgcgatggacagcaac
gccggcgattggcagggcattttgccttacgacgagtcgagcgggttggtcgccgaactg
gcggggcagttggcggatctgctggcccaattgagccattggcggcaagtcttgagcgaa
gcgcgctcgctcgaggcatggctaccgctgtgccgacagctgctggatgccttcttcgaa
gcggatagcgataccgaagtggtgctggcattgatcgagcagcagtggcaacaggccatc
aattttggcctggcggcgcgctatccggatgacgtgcccttgacgattctgcgcgacgat
ttggcggcgcgcctcgatcaggagcgcatcagccagcgcttcctcgccgggcaaatcaac
ttctgtacgctgatgccgatgcgctcgattccgttcaaggtggtgtgcctgctgggcatg
aacgacggcgtgtatccgcgcacgttgccgccattgggttttgatctgatggcgcagcag
gtcaagcgcggcgaccgcagccggcgcgatgacgaccgctatctgttcctggaggcgatt
ctgtccgcgcaacaacggctgtatatcagcttcattggccgttccattcaggacaacagc
ccgcgctatccttcggtgctggttaccgagctgctggagtatctggagcaaagctattgc
ctgccgggagacgaggcgtgcaccgcagacgacagcgcccggcgagtgggcgagcatttg
ctgaagtggcatgcgcgcatgccgttcgccgccgagaatttcttgccgggctcggaagcg
caaagctatgccgccgagtggctgcccgccgccgacgggcgcggggcggcgcacccggcc
ttcaaccagctgctgcccgccgaaacgctgcagcaaatatcgttggatgagctgctgcgg
ttttaccgccatcctattcgcgccttcttccagctgcggttgggcgtcagctttatcctg
gaagagaccgagctgccggacgaagagcccttcacgctggataacctcagccgctaccag
ttcaacagccaactgctgaataccctgattgacggcgacgatcccgaacggttgttccaa
cgggtgcgcgccgccggggggttgccctatggcgccttcggcgagatctattggcaaaag
cagcaggaagagatgagcgaactggccgagcaggtgcgtgcggaacgcgcgcagagccac
agcctggaattggatatcgatatcgccggcgtacgtctcagcggctggctgcatcaggtg
caggatgacggcctgttgcgctggcggcccgccacgttgtcggcggtggacggcatattg
ctgtggctggagcacctggtgtactgctgcgccggcggcaccggcgagagccgcatgtac
ggtcgcaagaactccgcctggcgctttgccgcgcttgcgcctgaagaggcgcaggcgcag
ctggcggaactgctggcgggctatcagcgcggtctgtgtcagccgctgctgttgctgaac
aagagcggctgggcgtggctgagtcagtgctatcagccggaaacgcagcaaatcgactgg
gaagaagaagcgcaaacaaaggctcgcgccaaattgctgcaggcttggcagggcgatcag
cgcattcccggagaaggggaagatccctatgttcagcgagtgttccgccaattggacaat
gactacctggcgcaaatactggccgaaacagagcgttatctgctgccggtggcgtgtcat
aacctggggtaa
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