Serratia ureilytica: J0X03_04305
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Entry
J0X03_04305 CDS
T07185
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
suri
Serratia ureilytica
Pathway
suri03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
suri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
J0X03_04305 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
suri03400
]
J0X03_04305 (recB)
Enzymes [BR:
suri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
J0X03_04305 (recB)
DNA repair and recombination proteins [BR:
suri03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
J0X03_04305 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
AAA_12
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QSR08218
LinkDB
All DBs
Position
936196..939747
Genome browser
AA seq
1183 aa
AA seq
DB search
MTEVAPQRLEPLTLPLFGERLIEASAGTGKTFTIGALYLRLLLGLGGEAAFPRPLTVEEI
LVVTFTEAATEELRGRIRDNIHGLRIACVRGISANPLFSALMEEIDDLSDAAAQLLAAER
QMDEAAIYTIHGFCQRMLTHNAFESGMLFEQTLVQDELPLRRQACADFWRRHCYPLPLGV
ARAISQEWSGPEALLADLSGYLHGEAPALRRPPKDEETVLMRHEQIVARIDAIKAQWRAA
AGDLEALIAQSGVDKRSYSSKHLPNWLNKVGEWSGQETQDYQLPKELDKFRQSVLLEKTK
KGEPPRHALFTAIDELFDEPLTLRDLIMARALSEIRTSIQQEKRQRAELGFDDLLSRLDS
ALQSGGGEQLAQAIRQRYPVAMIDEFQDTDPQQYRIFQKLYVGRPDCGLLLIGDPKQAIY
AFRGADIFTYMRARSEVSAHYTLETNWRSSPSMVASVNHLFSQVEKPFLFGQIPFIEVNA
AEKNQGLAFELHGKPQPAMQFWLQQGEGAGVSDYQQLMARLCATQIRDWLSAGQQGLARL
QSGKASRPVQASDITVLVRSRNEAALVRDALSALSIPSVYLSNRDSVFDTPEAKDLLWLL
QAVLAPEQERTLRSAMATGLMGLDAPTLDGLSRDERAWDALVNEFDNYRTLWLRRGVLPM
LSEVMKTRQLAENLLASAGGERRLTDVLHLGELLQEAAAQLDSEHALVRWLAQQIAQPNR
QSDNQQLRLESDRHLVQVITIHKSKGLEFDLVWLPFVGNFRQQQQALYHDRHSFQALLDL
DANEESQAWAEEERLAEDLRLLYVALTRSVYHCSIGIAPLFQGTRKKQGDTDLHRSALGY
LVQGGQPGDAVYLQERLQQLVGGGIALSLVEPPDAEPWQPQASLAEALAAKSFTRRIQDF
WRVTSYTGLQQHGASLMQDLLPRLDVDAAGERGEESEPALTPHTFPRGATPGTFLHSLFE
TLDFTQPLDEQWLLEQLQQQGFAEHWQPILLAWMQVLLNTPLDDSGVTLAALTPQHKQAE
LQFYLPINRLLQAKELDALVKRYDPLSARCPALDFHQVQGMLKGFIDLVFCWQGKYYLLD
YKSNWLGEDSSAYTRPAMEQAMAEHRYDLQYQLYTLALHRYLRHRLPDYDYRRHFGGVIY
LFLRGVDAAHPGNGIYTCLPAFELVAGMDSLFSGEAAATEEKS
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgacggaagtcgccccgcagaggctagagccgctgacgctgccgctgtttggcgaacgc
ctgatcgaggcgtcggcgggcaccggcaaaacttttaccatcggcgcgctgtatctgcgc
ttgctgctgggattggggggggaagcggcgtttccccgcccgttgacggtcgaagaaatc
ctggtggtgacctttaccgaggccgccaccgaggagctgcgcgggcgtatccgtgacaat
atccacgggctgcgcatcgcctgcgtgcgcggcatcagcgctaacccgctgttttcggcg
ctgatggaagaaattgacgatttgtctgacgccgctgcgcagctgctggcggcggagcgg
cagatggacgaagcggcgatttacactatccacggcttttgccaacggatgttgacccac
aacgccttcgagtccggcatgctgtttgaacaaacgctggtgcaggacgaactgccgctg
cggcggcaggcctgcgccgatttctggcgccgtcattgctatccgttgccgctgggcgtg
gcgcgtgcgatcagccaggagtggagcggcccggaagcgttgctggccgacctttccggt
tatctgcacggtgaagcgccggcgctgcggcggccgccgaaggacgaagaaaccgttctg
atgcgccacgagcagattgtcgcgcgcatcgacgccatcaaggcgcaatggcgggcggcg
gcgggcgatcttgaggcgttaatcgcccagtccggcgtcgataagcgcagctacagcagc
aaacacctgccgaactggttgaacaaggtcggcgaatggagcgggcaggagacccaggat
taccaactgccgaaggagctggacaagtttcgccagtcggtgctgctggagaagaccaag
aagggcgagccgccgcgtcatgcgctgttcacggcgatagacgaactgttcgatgaaccc
ttgacgttgcgcgacctgatcatggcgcgcgcgctcagcgagatccgcacctccattcag
caggaaaagcgccagcgcgccgagctggggtttgacgacctgctcagccgtttggacagc
gccctgcaaagcggcggcggcgaacagttggcgcaggcgatccgccagcgctatccggtg
gcgatgatcgatgaattccaggataccgatccgcagcaataccgtattttccaaaaactt
tacgtcggccggcctgattgcggcctgctgctgatcggcgatcccaagcaggcgatttac
gcctttcgcggcgccgacatctttacctacatgcgcgcgcgttcagaggtgagcgcccac
tatacgctggagaccaactggcgctcgtcgccgtcgatggtcgccagcgtcaatcacctg
ttttctcaggtagaaaaacctttcctgttcggccaaatcccctttattgaggttaacgcg
gcggaaaagaaccaagggctggcgtttgaattgcacggcaagccgcagccggcgatgcaa
ttctggctgcagcagggggaaggcgcgggtgtaagtgattaccaacagctaatggcgcgc
ctgtgcgccacgcaaattcgcgactggctcagcgccgggcagcagggcctggcgcggctg
cagagcggcaaggcgtcacggccggtgcaagcctctgatatcacggtgctggtgcgcagc
cgcaacgaggcggcgttggtgcgcgatgcgctcagcgcgctgtctattccgtcggtctac
ctgtccaaccgcgacagcgtgtttgacaccccggaggccaaagacctactgtggttgctg
caggcggtgttggcgccggagcaggagcgcacgctgcgcagcgccatggccaccgggctg
atggggctggacgcgccgacgctggacggcctgagccgcgatgagcgcgcctgggacgcg
ctggttaatgaattcgacaattaccgcacgctctggctgcgccgcggcgtgttgccgatg
ctgagcgaggtgatgaaaacgcgccaattggcggagaacctgctggccagcgccggcggc
gagcgtcgcttgaccgacgtgctgcatctgggggagctgttgcaagaagcggcggcgcag
ctcgacagcgagcatgcgctggtgcgctggctggcgcagcagatcgctcagcctaatcgc
cagtccgacaatcagcaactgcggctggagagcgaccggcatctggtgcaggtgatcacg
atccacaagtccaaggggctggagttcgatctggtgtggctgccgttcgtcggcaacttc
cgccagcagcagcaggcgctgtatcacgatcgccacagtttccaggcgttgctggacctc
gacgccaatgaagagagccaggcctgggcggaggaggagcggttggcggaggatctgcgt
ctgctgtatgtggcgctgacccgctcggtgtaccactgcagtatcggcattgcgccgctg
ttccagggcacgcgcaagaaacagggcgataccgacctgcaccgcagcgcattgggctat
ctggtgcagggcgggcagcccggcgacgccgtgtatctgcaggagcggctgcagcaattg
gtgggtggcggtatcgcgctgtcgctggttgaaccgccggatgcagaaccctggcaaccc
caggcgtcgctggccgaagcgttggcggcgaaaagctttacccggcggatccaggatttt
tggcgggtgaccagctataccggtttgcaacagcacggcgcgagcctgatgcaggatctg
ctgccgcgtctggatgtcgacgcggccggtgagcgcggggaagaaagtgagccagcgctt
acaccgcataccttcccgcgcggcgcaacgcccggcaccttcctgcacagcctgtttgaa
acgctggacttcacccagccgctcgacgaacagtggctgctggaacagctgcagcagcaa
gggtttgccgaacactggcaaccgatactgctggcgtggatgcaggtgctgctcaatacg
ccgctcgatgacagcggcgtgacgttggcggcgctgacgccgcagcataagcaggcagag
ctgcagttctatttaccgattaaccggctgttgcaggcgaaggagctcgatgctctggtg
aagcgttacgatccgctttccgcccgctgcccggcgctggatttccatcaggtgcagggc
atgctgaaaggctttatcgacctggtgttctgctggcaaggcaaatactacctgctggac
tacaagtccaactggctgggggaggacagcagcgcctatacccggccggcgatggagcag
gcgatggcggagcatcgttatgatctgcaataccagctgtatacgctggcgttgcatcgt
tatttgcgccatcggttgccggattatgattaccggcgccatttcggcggggtgatttat
ctgttcctgcgcggcgtggatgcggcgcacccgggcaacggcatttacacctgtctcccc
gcgtttgagctggtggcgggaatggatagcttgttcagcggcgaagctgcggcgacggag
gaaaaatcatga
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